Magallana gigas (Pacific oyster): 105340431
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Entry
105340431 CDS
T03920
Name
(RefSeq) BLOC-2 complex member HPS6 isoform X1
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105340431
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
105340431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6
HPS6_C
Ccdc124
Motif
Other DBs
NCBI-GeneID:
105340431
NCBI-ProteinID:
XP_011444769
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All DBs
Position
7:complement(47593098..47603212)
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AA seq
742 aa
AA seq
DB search
MSTAPILFSLEKTVPICRIQLYRDVVCKEKYGPLDRVWICPGHVFVSVRDGRQLYTFDTK
NTTQDENKGCLDLQNLDPPLLEVLSYDANQSVYIVQQNGYVQCWKFRADRIWILEQEFNI
CNSNRSEVTSVCLHPTHNTLYWCEKRTTSSSGQSVFCICRRKITNGEETVSERELGPVEA
IMHNICLCHLHPLQHGLAIVIKSKPPLVSMVIYWNQSSNSVTMYSGPYTLVVENSTSSQA
FDFTSLAFKFISISIQVRNKYAMLGYAYNTQKMELTIIEEGSVIRRLSAGSRMCDKLNEV
QLEVGADKIEKGATWFCHQGNLGLLHKTNLLLFDMDSGKLVNSIAPQEGSVFLGMCNTSP
ASVVSAVYTGDNVYVIMKQKKKEEWDFSTTSSLKDFQTTALHIAHLEQEKTDNPSTKVKQ
SLSHLKQTWQKSNDQKPGTKLAEIVAPYLEEYWKLENISTEAFQPSKLACPTCVEDEVLH
ILDPNSSLLMSDRHARLLSLAHSNPKQVLAVLESQMEFDTDDISAAQIQRWQCILAPDVS
VSPVSSDVAVPMFEHICRLLYKLEPKKLMQFVKICQMINDQKVGVSAFIRKRQAIHYYER
AVVCIQDIDDVVTSPDSAQAFVSLLLASKQEHCETRALQFYLDAGQWELSLDLLRDYCDN
SQLHFLLFHRLLDKFNKEDVLTDYAVMVFSLMPNIKSLSSVTELIPPCDTWTALDVFSSS
CVPFGQIKPILQKKLLAEDPAD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagcgcctattcttttttcgttggaaaaaactgttccaatatgtcgcatacag
ttatacagggatgtggtttgtaaagagaaatatgggccactagatcgagtctggatttgt
cctggccatgtgtttgtatcagttcgagatggcagacagctctatacatttgacacaaaa
aatacaacacaggatgaaaacaaaggctgtcttgatttacaaaacctagatccacctctt
ctagaggtcttgtcatatgatgccaatcagtcagtttatattgtccagcagaatggatat
gttcaatgctggaagttccgtgctgacagaatctggattttagagcaggaatttaatata
tgcaacagtaacaggtcagaggtcactagcgtgtgtctgcatcctacccacaataccctc
tactggtgtgaaaaaagaacaacttcctcctcaggacagtctgtattctgtatatgtaga
cggaaaattacaaatggggaggagacggtatcagagcgtgaactgggtccggtggaagcc
atcatgcacaacatctgtctctgtcatcttcatcctttgcagcatggacttgctattgtc
ataaaaagtaagccccctttagtgtccatggtaatttattggaaccaaagctcaaactcc
gtcactatgtactcagggccttacactttggttgtggaaaattccacctcctctcaagca
tttgatttcacttcattggcattcaagttcatcagcatcagcattcaggtaagaaataaa
tatgcaatgcttggctatgcgtacaatactcagaaaatggaactgacaatcatagaggag
ggcagcgtgatccggaggctgtctgctgggagcagaatgtgtgataaattaaatgaagta
cagttggaggttggtgcagacaaaatagagaagggtgccacttggttttgtcaccaagga
aatcttggtcttcttcacaagactaatctgcttttatttgacatggactcagggaaactt
gtgaactcaatcgctccacaagagggatctgtgttcttgggaatgtgcaataccagccct
gcctcggtagtatctgctgtgtacactggggacaatgtatatgtcattatgaaacaaaaa
aagaaggaagaatgggacttcagcacgacatcatccttgaaggactttcaaacaacagct
cttcatattgctcaccttgagcaggaaaaaactgacaatccatcaactaaggtgaagcaa
agtttgtcacacttaaagcagacctggcaaaaatctaatgaccagaaaccaggcacaaag
cttgctgaaattgtggcaccttatctggaagaatattggaagttggaaaatatttctacc
gaagcatttcagccttctaagttagcttgccccacctgtgttgaagatgaggttctccac
attcttgaccccaattcctctctcctcatgtcggaccgccatgcccgcctcctctctctg
gcccactccaacccaaaacaagtcctggcggttcttgaatcacagatggagtttgataca
gatgatatcagtgcagcccagatccagcgctggcagtgcattctggccccggatgtttct
gtgagcccagtcagcagtgatgttgcggtcccaatgtttgagcacatctgtcgtcttctg
tacaagctagaaccaaaaaaactgatgcagtttgtgaagatttgtcaaatgatcaacgac
cagaaagtgggagtgtctgccttcattagaaagcgacaagcgattcattattatgaacga
gctgttgtttgtatacaagacatagatgatgtagtgacctcccctgattcggcccaggca
tttgtctctctgctgttggccagtaaacaagagcattgtgagacacgggccttgcagttc
tatctggatgctggccaatgggaactgtccttggatttactgcgggactactgcgacaac
tcacagcttcacttcctgttgttccaccgcctcctggacaagttcaacaaggaggatgtt
ttgacagactatgcagtgatggtgttttctttgatgccaaatatcaaaagcttgagctca
gtgactgaactgattcccccttgtgatacatggacagccttggatgtgttctcatctagt
tgtgttccctttgggcagattaaacctatactgcagaaaaaactgctggctgaggaccca
gcagattga
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