Magallana gigas (Pacific oyster): 105341190
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Entry
105341190 CDS
T03920
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105341190
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105341190
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105341190
Transcription factors [BR:
crg03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
105341190
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
MOM1
Motif
Other DBs
NCBI-GeneID:
105341190
NCBI-ProteinID:
XP_034327347
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Position
8:complement(13935923..13950982)
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AA seq
908 aa
AA seq
DB search
MSQKEDTGESQRVPEMPLDTNGSIEDYVDVELEKLTVCLALPGQIKKKANSALEMLLNHD
EHKMISKSSAIVCAIYIAAIDVRMPYGPSDPQLEIGYLDKPEITVSDIIQKSQNSVPVLF
KWMNHFRDARLSDAVRFHLKQLEKDYCVVSALYHTHERLCCSIFKEEQRGETDGIPLQTL
SCVNDKKQLCWVLFLLAKERLLTDCQIVEAFYILVCCYEFVLRTTPGFQLNTPYDDVQVS
EDSEKHSGLMLKTLCEQFDLSYEEVSLVQKNRVEPCFQKLFNGDKSLELTALTEQYEKDY
RQKGDLNELLFLRNDPHLQPLEQNGNLSSPRNDEPDGPPITPVSDLIEKINTLSVNGDCV
EPTLRAALNTIQNLKKILFSTRDEPSPDLLVHFKNCSQNPLSSIKERLGRLETVFTNTFA
EQTDRNQTAIAKQRFVLAKRLYYRVMESMLNHERERLSQTDFSKLLNIDTFHVSLLACSL
EIVMMTYGASWNASFGTVCAGDSKFSFPWIIQTFGLHCYDFFKVLESFIKAEPILTKEIV
KHLQNLEKRILEELAWTPESPVFEALSKSEAQAVQLDPPPFPPVQATLSSADMYLSPMRV
VVKSKSSSSLSGQSPQKTASTFSGHELPSPDKSTGKKSQSLAIFLNKVCRLGYHRLEQLF
SLLFLPKDIQQRIWTCLEYCVTKRTGLLKNRHLDQIMLCSVYGICKVMEREIKFKDIIRT
YSELPQASPNVYRRALIEGCEYDSIIVFYNRVFMHNMKNFILQFAPTRQSPTLSPAPRNI
TSPVYSIASRRNFYVSPLKDSPFKPPLSPSQMTPRSLQLYSFGDISGSNEKLQRINESML
RAKNGLTKTTPKSQKRLHFDPPPESSPAATQSSEIPTVVKKVKMSENSRNHPSGTEENGG
DDSQETSR
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaaagaggacacaggggaatctcagcgtgttcctgaaatgccattggacaca
aatgggtctattgaagactatgttgatgttgaattggagaaactgactgtttgtttggca
ttgcctggtcagataaaaaagaaagccaactctgccttagaaatgttgctcaatcatgat
gaacacaaaatgatctcaaagtctagtgcaatagtttgtgcaatatatattgcggccatt
gatgtaagaatgccgtacgggccctctgatccccaactagagattgggtacttggacaaa
ccagaaattacagtttcagatatcatacagaaatcccaaaacagtgtgccagtattattt
aaatggatgaaccattttcgtgacgctcgtttaagcgatgcggtcagatttcatctgaaa
caactggagaaagattactgtgtcgtctctgcactgtatcatacacatgaaaggctgtgt
tgttccatctttaaagaagagcaaagaggggagacagatggcattccattacagacctta
agctgtgtgaatgacaagaagcagctgtgttgggtcctatttcttctcgccaaggagaga
ttgttgaccgactgtcagattgtggaggccttttacatcttggtttgctgctatgaattt
gtgctacgcaccacacctggtttccagttgaatactccttatgatgatgttcaggtttca
gaggactcggagaaacactcaggactgatgttaaagactctttgtgaacagtttgatctc
tcctatgaagaggttagtcttgtgcagaagaacagagtggaaccctgctttcaaaaacta
tttaatggagataaaagcttagagctaacagccctgacagagcagtatgagaaggactac
agacagaaaggagacctgaatgagttactgttcctgaggaatgacccccacctccaaccc
ctggaacagaatggcaatctgtcatcaccaagaaatgacgagcccgatggaccacccatc
acacctgtcagtgacttgatagagaaaataaacacattgtctgtgaatggagactgtgta
gagccaaccctcagagcagctctgaacactatacagaacttgaaaaagatactgttcagc
actcgggatgaacccagtccagacctcttagttcattttaagaactgctctcagaaccca
ctgtcgtcaatcaaggagcgactcggtcgtttagagacagtcttcactaacacattcgct
gagcagacagacagaaaccagacagccattgctaagcagagatttgttctagccaagcgt
ctttattacagagtgatggagtccatgttgaatcatgagagagaacgattgtcacagaca
gatttcagcaagctgttaaacattgacaccttccacgtctcgctgcttgcctgttccctg
gaaatcgtgatgatgacttacggagcttcttggaacgcttcatttgggactgtgtgtgct
ggagattcaaaattctctttcccttggataatacagacatttggtctccattgctatgac
ttcttcaaagtgctggagagttttatcaaagcagaaccaattttgaccaaagagattgtg
aagcacttacaaaatttggagaaaaggattttagaagagctggcatggaccccagaatcc
cccgtgtttgaagctctgagtaaatctgaggctcaggctgtccagttggatcccccaccc
ttcccaccggtccaagccactctgtcctcggctgacatgtatttgtctccaatgagagtt
gtggtcaagagtaaatcatcttcctccttgagtggacaatcgccacaaaaaacagcctcc
accttctcaggacatgaactgcccagtcctgacaaatccacgggaaaaaagtcacagtct
ctggctatcttcctcaataaagtttgtcggttgggataccatcggctggagcagctgttc
tctctcctgtttttacccaaggatattcaacaaaggatctggacttgtttggagtactgt
gtaacgaaaagaactggtttgctaaaaaaccgccatctagatcagataatgctatgctct
gtgtatggaatatgtaaggtgatggagagagaaattaagttcaaagacatcatcaggaca
tacagtgaacttccccaagcaagtcctaatgtttatcggcgggctctgatagaaggatgt
gagtacgactcaatcatcgtcttctacaaccgagtctttatgcacaacatgaagaacttc
atacttcagtttgctccaaccagacagtcccccactctgtcccctgctccaaggaatatt
acctcccctgtctacagcatagcatcacgacgcaacttttacgtgtcgccgctgaaggac
tccccatttaaaccaccactgtcccccagccagatgactcccaggtccctgcagctatac
agttttggggacattagcgggtccaatgagaagcttcaaagaataaatgagtccatgttg
cgagctaaaaatggcctcacaaaaaccacccccaagagccagaaacgattgcactttgac
cccccacccgaaagttctccagcagctactcaatcatcagagattcctaccgtggtaaag
aaggtcaagatgtcggaaaattccagaaaccatccgtcagggacagaagagaatggtggg
gatgactcccaagaaacttcccgatga
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