Magallana gigas (Pacific oyster): 105346267
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Entry
105346267 CDS
T03920
Name
(RefSeq) lysine-specific histone demethylase 1A isoform X1
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105346267
Enzymes [BR:
crg01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
105346267
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
105346267
REST complex
105346267
Histone demethylases
105346267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
AlaDh_PNT_C
Pyr_redox_2
FAD_binding_2
Pyr_redox
Thi4
FAD_binding_3
HI0933_like
FAD_oxidored
Pyr_redox_3
GIDA
DUF489
MCRA
Lycopene_cycl
MurD-like_N
NAD_binding_9
Trypan_PARP
2-Hacid_dh_C
TrkA_N
PhoQ_Sensor
Motif
Other DBs
NCBI-GeneID:
105346267
NCBI-ProteinID:
XP_011453071
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Position
LG5:complement(36451555..36467296)
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AA seq
792 aa
AA seq
DB search
MEEKKRSPTEEDNEEESRRSSRRKKAKVEYKEVEEQVTTVSDEDMESDEEKKDKEKEKEK
EKEKEKAPVEDKKPPQPQPQPTPQPQPAAKTDPEPEPENDSENDDPTGLEGAAFQSRVPF
DKMTSQEAACFPDILQGPPQSQKVFLHLRNRILQLWLENPKQQLTFEVALPQIEAPYNSD
GPLVMRVHAYLERFGYINFGVFKRLKPLPAKKHGKVIIIGAGIAGLTAARQLMAFGMDVT
ILESRDRVGGRVATFRKNNYVADLGAMVVTGLGGNPMTILSRQINMELHKIKQKCPLYET
SGSTLPNEKLLQVPKDKDEMVEREFNRLLEATSYLSHQMDFNFVNNKPASLGQALEAVIT
MQEKHVKEKQCEHQRHIIELQEKLKKNQNSMLSLKDKVEELHKQWKEASEVKPPRDITAE
FLVKSKLRDLNAACKEYEQLQTQQKEIEDKLHEMENSHPRFGCSDVYLSSRDRQILDWHF
ANLEFANATPLSLLSLKHWDQDDDFEFSGSHLTVRNGYSCVPVALAEGLDIKLNTAVRKC
NYSATGVELVVSNAKNNTNQQTLKADAVLCTLPLGVLKECIKGNGLNCVQFSPSLPEWKS
SAVQRMGFGNLNKVVLCFDRVFWDPNANLFGHVGSTTASRGELFLFWNLYKAPVLLALVA
GEAAAIMENVSDDVIVGRSLVVLKGIFGNNAVPQPKETLVTRWRADPWARGSYSFVAAGS
SGNDYDLMATPVSHTSGGLPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAPY
ALPTHKNEGVKT
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaagcgatctccgacagaggaagacaatgaagaggaaagcagacgctca
agccgtaggaagaaggcaaaggttgaatataaagaggtagaggagcaagtcacaactgtt
tctgatgaggacatggaatcagatgaggagaagaaagacaaggagaaagagaaggagaaa
gagaaggagaaagaaaaagctcctgttgaggacaagaaacctcctcaacctcaacctcag
cctaccccacagcctcagccagctgccaagaccgacccagaaccggaaccagaaaatgac
agtgaaaatgacgacccaacaggtttagaaggagcagcttttcagagcagagtacccttt
gacaagatgacatcacaagaggcagcctgttttcctgacatcctacaaggtccacctcag
tcccaaaaagtcttcttacatctcaggaacagaattcttcaactttggctggagaatccc
aaacagcagctgacatttgaagtagccttaccacagatagaggcgccatacaacagtgac
ggtccgcttgtgatgagagtacatgcgtacttagagaggtttggctacatcaactttgga
gtattcaaaagacttaagccacttccagccaagaaacacggtaaagtgataataatcgga
gccggaatagcgggtcttacagcagcccgacagctgatggcattcggaatggatgtcacc
atcttggaatcaagggaccgtgtgggaggaagggtggccaccttcaggaagaacaattac
gtagctgacctgggcgcgatggttgttaccggtcttggtgggaacccaatgacgatactg
agtagacaaatcaacatggaactccacaaaatcaaacagaaatgtcctctgtatgaaacc
agcggaagcacattacccaatgaaaagttattgcaggtacccaaagacaaggatgagatg
gtggagagagagttcaacaggttactggaggccacctcctacctctcccaccagatggat
ttcaactttgtcaacaacaagcccgcctccctggggcaggctctggaggcagtcatcaca
atgcaggaaaaacatgtgaaggagaagcagtgcgagcaccaaagacacatcatagagtta
caggagaaactcaagaagaaccagaactctatgctttctctgaaagacaaggtagaagag
ctacacaaacagtggaaagaggcatcagaagttaaaccgccaagagacataactgctgag
ttccttgtcaaaagcaaactcagagatctgaatgcagcgtgcaaagaatatgagcaatta
caaactcagcagaaggaaattgaggacaaactacatgaaatggagaactcccatccaaga
tttggttgcagtgacgtgtacctgtcctctcgagatcgccagatcctcgactggcacttt
gccaaccttgagtttgccaatgccacacccctttctttgttgtcactcaaacattgggat
caggacgacgactttgaattttcgggcagtcatttaacagtgcgtaatggctactcctgt
gtcccagtggcccttgcagaaggactggacatcaaactgaacacagccgtcaggaagtgc
aattactcggccacgggggtggagctagtggtcagcaacgcaaagaacaacaccaatcaa
cagacgctgaaggccgacgctgtcctctgtaccctcccactgggcgtgctcaaagagtgc
atcaagggtaacggccttaactgtgtccagttcagtccctccctgcccgagtggaaatcg
tcggccgtgcagaggatgggattcggaaatctcaacaaagttgtgttgtgttttgaccga
gtgttctgggaccccaacgctaacctgtttggtcatgtgggtagcaccacggccagccgc
ggtgaactgttcctgttctggaacctctacaaggcccccgtgttactggcactggttgcc
ggggaagcggcagccatcatggaaaatgttagcgatgatgtaattgtcgggcggtctctg
gtggtcctcaaaggcatttttggaaacaatgctgtgccacagcccaaggagaccctggtg
acaagatggagggctgatccctgggctagaggatcctattcttttgtagcagctggctct
tcaggaaacgactacgatctgatggcaaccccggtctctcacacgtcggggggactgccc
cgcctattcttcgcgggggaacacaccatcaggaactaccccgccacggtccacggggca
ctcctcagtggtcttcgggaggcgggtcggatagcggaccaattccttggggcgccgtat
gccctacccacccacaaaaacgaaggtgtgaagacgtaa
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