KEGG   Magallana gigas (Pacific oyster): 105347536
Entry
105347536         CDS       T03920                                 
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:crg00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    105347536
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF Sina_ZnF zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-TRAF_2 TRAF3_RING zf-RING_2 zf-RING_5 zf-RING_UBOX Prok-RING_4 zf-C3HC4_5 EzrA RIF5_SNase_1 Crescentin Spectrin_SYNE1 TMPIT zf-C3HC4_4
Other DBs
NCBI-GeneID: 105347536
NCBI-ProteinID: XP_019930588
LinkDB
Position
6:complement(53071111..53081759)
AA seq 562 aa
MLTPQITPPSSLSSQTPPGHPEFVGVDSKYVCVLCNNVLQDAVQTPCGHRLCQPCVDTYL
QDGQPQPCPYQEEFCEMLQANQILRDASARREIRQLPVYCSNKSRGCQKTLKWKELEKHL
TECWFEPLPCPYKDWGCQEPVPRGSLTDHQQTCWYTPVNCQFCGEQVPKLSLETHKNETC
NKIPIPCPFGCGIDPVPRNEMFTHQESCPKRPVVCKFASVGCTFQGPAEELELHERQNTE
EHIQQATLKMADVDLYRIDIRKEVQELSVHRQDARQKVNDIKKEIQDIKNMLDDVRRQDR
KRKIDMVDLTERIIRVEKQLEEVSKPEVQQRMTSDLNIARENVRKLKDRLDRLIAAEESG
GGATAVGTVEIPDPFADLQQQTRQLGLQEARLSELDIRFQILETLNYEGVLIWKITNYRR
RKQDAVSGTAVSIYSSPFFTSRYGYKMCSRAYLNGDGMGKGTHFSIFFVVMQGEYDALLS
WPFRQKVTFMILDQNGNRRHLSDSFRPDPDSSSFKRPLAEMNIASGCPLFVSHSILESSD
NYIKDDCLFVKVMVDTTGLNPI
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgttgacccctcagatcactcccccgagcagtttgtcgtcccagaccccccctggacac
ccagagtttgtaggagttgactccaagtacgtgtgtgttctgtgtaacaatgttctacag
gacgccgttcagaccccgtgcggtcaccgtctctgtcagccatgtgtggacacctatctc
caggacggacaacctcaaccttgcccctaccaggaggaattctgtgagatgctgcaggca
aaccagattcttagagatgccagtgcaagaagagagattcgacagcttcctgtttactgt
tccaataaatccagaggatgccagaaaaccctcaaatggaaagagcttgagaaacacttg
actgagtgttggtttgaacctctcccttgtccctacaaagattgggggtgtcaggaaccg
gtcccgcggggaagtctgacggaccaccaacagacctgttggtacactcccgtcaactgt
cagttctgtggagaacaggtgcccaagttatcactcgagacacataaaaatgaaacctgc
aataaaattcccattccttgtccatttggttgtggcattgatccagttccaagaaatgag
atgttcactcatcaggagagctgtcctaagcgacctgttgtctgtaaatttgcctctgtg
ggctgtacatttcagggaccagcagaagagttggagcttcacgagagacagaacactgag
gaacatatacagcaggccacactcaaaatggctgacgttgacctctacaggatagacatt
aggaaagaagtccaggaattaagtgtccatagacaagatgctcgacaaaaggttaatgac
ataaagaaagagatacaggatataaaaaacatgctagatgacgtcaggcgtcaggatcgg
aaaagaaaaattgacatggtagacttgacagaaagaattattcgtgtggaaaaacagttg
gaggaagtctccaaaccagaggtacagcagagaatgaccagcgatctgaacatagcacgg
gaaaatgttaggaaacttaaggaccgcctggacagactaatagcagcagaggaatcaggg
ggaggggccacagcagttggcactgtcgaaatcccagacccttttgccgacctacagcaa
cagaccagacaactaggtcttcaggaagctcgcctctcggagctcgatatccgattccag
attctagagaccttaaactatgaaggtgtgttaatctggaaaatcacaaactaccgacga
cggaaacaggatgcggtgtctggaacagctgtttccatctatagctctccgttttttacc
agtcgttacggatacaaaatgtgttcacgggcttatctgaatggtgatgggatgggaaaa
ggcacacacttttctatattttttgttgtgatgcagggggagtacgatgcactcctgtcg
tggcctttcagacagaaagtgacattcatgattctggaccagaatggaaacaggagacat
ttgtcagattcttttagaccggacccagacagttcaagctttaagcgaccacttgctgag
atgaacattgcctctggatgtcccctgtttgtcagtcactctatcctagaatcttcagat
aattacataaaagatgactgtctttttgttaaagtgatggtagacactacaggacttaat
ccaatttaa

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