Magallana gigas (Pacific oyster): 105347536
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Entry
105347536 CDS
T03920
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105347536
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
Sina_ZnF
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-TRAF_2
TRAF3_RING
zf-RING_2
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-C3HC4_5
EzrA
RIF5_SNase_1
Crescentin
Spectrin_SYNE1
TMPIT
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
105347536
NCBI-ProteinID:
XP_019930588
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Position
6:complement(53071111..53081759)
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AA seq
562 aa
AA seq
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MLTPQITPPSSLSSQTPPGHPEFVGVDSKYVCVLCNNVLQDAVQTPCGHRLCQPCVDTYL
QDGQPQPCPYQEEFCEMLQANQILRDASARREIRQLPVYCSNKSRGCQKTLKWKELEKHL
TECWFEPLPCPYKDWGCQEPVPRGSLTDHQQTCWYTPVNCQFCGEQVPKLSLETHKNETC
NKIPIPCPFGCGIDPVPRNEMFTHQESCPKRPVVCKFASVGCTFQGPAEELELHERQNTE
EHIQQATLKMADVDLYRIDIRKEVQELSVHRQDARQKVNDIKKEIQDIKNMLDDVRRQDR
KRKIDMVDLTERIIRVEKQLEEVSKPEVQQRMTSDLNIARENVRKLKDRLDRLIAAEESG
GGATAVGTVEIPDPFADLQQQTRQLGLQEARLSELDIRFQILETLNYEGVLIWKITNYRR
RKQDAVSGTAVSIYSSPFFTSRYGYKMCSRAYLNGDGMGKGTHFSIFFVVMQGEYDALLS
WPFRQKVTFMILDQNGNRRHLSDSFRPDPDSSSFKRPLAEMNIASGCPLFVSHSILESSD
NYIKDDCLFVKVMVDTTGLNPI
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgttgacccctcagatcactcccccgagcagtttgtcgtcccagaccccccctggacac
ccagagtttgtaggagttgactccaagtacgtgtgtgttctgtgtaacaatgttctacag
gacgccgttcagaccccgtgcggtcaccgtctctgtcagccatgtgtggacacctatctc
caggacggacaacctcaaccttgcccctaccaggaggaattctgtgagatgctgcaggca
aaccagattcttagagatgccagtgcaagaagagagattcgacagcttcctgtttactgt
tccaataaatccagaggatgccagaaaaccctcaaatggaaagagcttgagaaacacttg
actgagtgttggtttgaacctctcccttgtccctacaaagattgggggtgtcaggaaccg
gtcccgcggggaagtctgacggaccaccaacagacctgttggtacactcccgtcaactgt
cagttctgtggagaacaggtgcccaagttatcactcgagacacataaaaatgaaacctgc
aataaaattcccattccttgtccatttggttgtggcattgatccagttccaagaaatgag
atgttcactcatcaggagagctgtcctaagcgacctgttgtctgtaaatttgcctctgtg
ggctgtacatttcagggaccagcagaagagttggagcttcacgagagacagaacactgag
gaacatatacagcaggccacactcaaaatggctgacgttgacctctacaggatagacatt
aggaaagaagtccaggaattaagtgtccatagacaagatgctcgacaaaaggttaatgac
ataaagaaagagatacaggatataaaaaacatgctagatgacgtcaggcgtcaggatcgg
aaaagaaaaattgacatggtagacttgacagaaagaattattcgtgtggaaaaacagttg
gaggaagtctccaaaccagaggtacagcagagaatgaccagcgatctgaacatagcacgg
gaaaatgttaggaaacttaaggaccgcctggacagactaatagcagcagaggaatcaggg
ggaggggccacagcagttggcactgtcgaaatcccagacccttttgccgacctacagcaa
cagaccagacaactaggtcttcaggaagctcgcctctcggagctcgatatccgattccag
attctagagaccttaaactatgaaggtgtgttaatctggaaaatcacaaactaccgacga
cggaaacaggatgcggtgtctggaacagctgtttccatctatagctctccgttttttacc
agtcgttacggatacaaaatgtgttcacgggcttatctgaatggtgatgggatgggaaaa
ggcacacacttttctatattttttgttgtgatgcagggggagtacgatgcactcctgtcg
tggcctttcagacagaaagtgacattcatgattctggaccagaatggaaacaggagacat
ttgtcagattcttttagaccggacccagacagttcaagctttaagcgaccacttgctgag
atgaacattgcctctggatgtcccctgtttgtcagtcactctatcctagaatcttcagat
aattacataaaagatgactgtctttttgttaaagtgatggtagacactacaggacttaat
ccaatttaa
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