Magallana gigas (Pacific oyster): 105348867
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Entry
105348867 CDS
T03920
Name
(RefSeq) short transient receptor potential channel 7 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crg04040
]
105348867
Ion channels [BR:
crg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105348867
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
Ank
Ank_5
DUF3734
Motif
Other DBs
NCBI-GeneID:
105348867
NCBI-ProteinID:
XP_065921449
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Position
7:39375745..39414846
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AA seq
1071 aa
AA seq
DB search
MSNFDRHSYLLAEMEDTEDYHLAVDYGSAEHKRASTMPSQGSLFTNFEEVQLTDEERVYL
NAASMGDVGIVRQSLEEPDGALNVNCVDYMGRNALHLAIDSEKIGVIEILIDNLNFNCIE
EALLHAISKGATKIVKLIIEHPNFMAGEDRFKSFGVTEAFFRTEEKSQFPPDITPLILAA
HYNNHEIVQMFLSRNHKIEKPHCISCACTDCATKQNYDALKRSRSRLNAYRALASPAYMA
LSSPDPIMTTFELRQEMMKLAEVEKEFKSEYLALLEQCMNFACELIDLCRGTQEVEAVVS
EGTGCGEPLARLKMAIRYQEKKFVAHPNCQQHMTTLWYGSEMSFLQSLSLWKQLAFILLF
LPCIPFLCVAYIIFPNTKPGEVMRCPVTKFITHATSHICFLILLAAATFRLTESGVTITT
TFDIHNPTFESLTKDEKIQSLLKETLRPANTLLTHVQLCIVFWILGLLWIECKQLYSIGL
RAYITVYQKLIDFSVLSMYLASYVLRFFTEYKISQADRCFNGTHVARELLWQENYTYFNW
KLDEIKSTRNAPMNYFMEASRFHWKPNDPEIVSDVLFAIANVISFARTTYLMPAFEVLGP
LQISLGRMIGDITRFMVLFTLVLFAFMVGLHNLYWYYGAQRIKMVLNEKTIYVHAAEAFQ
GLRQTFYSLFWSMFGQVSISDIIVRHPGPTGERSCVQIDGGKIMCTEEIRNESVYGGPTP
ESVNMERSTDIVEQVGMYLFALYHVVIIIVLINMLIAMMSHSFEDIQTDCDVEWKFARTK
LWLNYMDEGSTLPVPFNMIPTPKSLCYAWRFCKDLLAISDVSWLEYQKNKKQTFIKKRRE
RVCKTLDLKVEDTSYSDIMQRLVKRYLFKMERAKDEKEIVKDGVPNLRNEDVEIVETNDT
PPPVPDAPSRIPYATPIHEEDEDDTHPINKNLRSGVGSKRKLCGRSNMRRVSSSVAPPPT
TLVIPQLDAIQRSQKLLDVRLQHLQANSKENNRIIDDIEFLRRVMTENQKALFNIIHALG
NMQGEIVDLVKCLSSTPVPDKNHSHMNSSNSVSKSSGKKRTSHQDDEESEV
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacttcgaccggcactcgtatcttttggccgaaatggaagacacagaagattac
cacctggccgtagattacgggtcggcggaacataagcgggcctcaaccatgccgtcacag
ggttcactgttcaccaattttgaggaagttcagcttacagacgaggagagagtgtacctg
aatgcagcctccatgggggacgtgggcattgttcgccagtctttggaggaaccggacggg
gccctgaacgttaactgtgtggattacatggggaggaacgctctacacctcgcaatagac
agcgaaaaaattggggttattgagattctaatcgacaacctgaactttaactgtatagag
gaggctctgctacatgcaattagtaaaggcgcaacgaaaatcgttaaactaattattgaa
cacccaaacttcatggcgggtgaggataggttcaaaagtttcggagtaactgaggcattt
ttcaggacagaagagaaaagtcaatttcctcccgacattacacctttgattttagctgct
cattataataaccatgaaattgttcaaatgtttttgtccaggaatcacaaaattgaaaaa
ccacattgcatatcatgtgcgtgcacagactgcgcaacaaaacagaactatgatgcttta
aagagatcgcggtctcgcttgaatgcatatcgggcacttgctagcccagcgtacatggcg
ctatcaagccccgaccctatcatgactacctttgaacttcgacaggaaatgatgaaatta
gcagaagtggaaaaggaatttaagagcgaatacctggcactgctggaacagtgtatgaac
ttcgcctgtgaattgattgatctctgtcgaggtacgcaggaagttgaggcggtggtgagt
gagggtaccggctgcggggaacctctagcccgacttaaaatggccatccgatatcaggaa
aagaagttcgtggcccaccctaactgccagcagcacatgacgactctctggtacgggtca
gagatgagcttccttcagtctctcagtctgtggaaacaacttgccttcatccttcttttt
cttccatgtattccgtttctatgtgtcgcatacatcatttttccaaacacgaaaccaggg
gaggtaatgcgctgtcctgtgacaaagttcatcacacatgccacgtcacatatatgtttc
ctcattttattggctgctgcaacatttcgactgacggagagcggcgtcaccataacaacc
acatttgatatacacaacccaacattcgaatctctaaccaaagatgaaaaaatacagagt
ttattaaaggaaactctgaggcctgcaaataccttgttaacccatgttcaactgtgtatt
gtattttggattctaggattgttgtggatagagtgtaaacaactgtacagcataggtctg
agggcgtatatcacggtctaccagaagctgatcgacttcagcgtactgtccatgtaccta
gcttcctatgttctgcgcttcttcacagagtacaagatatctcaggccgacaggtgtttt
aatggtactcacgtggcgcgagaactcctctggcaggagaactatacctatttcaactgg
aaacttgacgaaataaagagcacacggaatgcgccgatgaattatttcatggaggcatcg
cggtttcattggaagcccaacgacccagaaatcgtatcggatgttctgtttgccattgca
aatgtgataagttttgcaagaaccacctacctcatgcctgcatttgaggtcctcggacct
ctgcagatttctctggggcgaatgattggagacataacgagatttatggttttatttacc
ctggttctgtttgcttttatggttggtctccataatctatactggtactatggtgcgcag
cgaattaaaatggttcttaacgagaaaaccatatatgtccacgccgcggaggctttccaa
ggtttacgtcagacgttttacagtctgttctggtcaatgttcggacaggtcagcatcagt
gacattatcgtcagacatccaggccccacgggagagcgtagttgtgtacaaattgacgga
ggaaaaattatgtgtacagaagaaattcgcaacgagtcagtgtatgggggaccgacacct
gagtctgttaacatggagagaagcacagacatagtagagcaagtcggaatgtacctgttc
gctctttatcatgtcgtcatcatcatcgtgttaatcaacatgttaattgccatgatgagt
cattcctttgaggacattcagactgattgtgacgtagaatggaagtttgcgaggacgaag
ctgtggctgaactatatggacgagggcagtaccctcccggtacctttcaacatgatccct
acccccaagtctttgtgctacgcctggaggttctgtaaagacctgctggccatatcggac
gtgtcatggctggaataccaaaagaacaaaaagcagacctttattaagaaaaggagagaa
cgggtgtgtaagactcttgacctgaaagtagaggacacctcctatagtgacatcatgcaa
aggctggtcaaaagatacctcttcaagatggagcgtgccaaagatgaaaaagagatagtt
aaagatggagtgcctaatttgaggaacgaggatgttgaaattgtagagacaaatgacact
ccccctccagtaccggacgctcctagcagaattccgtatgccacgcccattcacgaggag
gatgaggatgacacacatcctatcaataaaaatctcaggtcaggagttggatcaaaacgg
aagttatgcggtcgttcaaacatgcgcagagtgtccagcagtgttgctcctcctcccaca
acgttagtgataccacaacttgatgctattcaacgatcacagaaactgttagacgttcgc
ttacaacaccttcaagctaatagtaaggagaacaatcgtatcatagacgatattgagttc
ttaaggcgtgtcatgacagagaatcagaaggcgctgttcaatataatacacgcccttgga
aatatgcaaggtgaaatagtggaccttgtcaagtgcttatcatcaacgccagtaccagat
aaaaatcatagtcatatgaactcttcgaattctgtatccaagtcttcagggaaaaagcgt
actagtcaccaggatgacgaagaaagtgaagtgtga
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integrated database retrieval system
