Magallana gigas (Pacific oyster): 117680310
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Entry
117680310 CDS
T03920
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117680310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
117680310
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
crg04990
]
117680310
Membrane trafficking [BR:
crg04131
]
SNARE
SNARE associated proteins
Others
117680310
Domain-containing proteins not elsewhere classified [BR:
crg04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
117680310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
Motif
Other DBs
NCBI-GeneID:
117680310
NCBI-ProteinID:
XP_034299151
LinkDB
All DBs
Position
3:47182952..47202305
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AA seq
969 aa
AA seq
DB search
MSLFKRKGPTPVEVAQENDIKQNITKELSTAVKKLQQEQQLNSDEPILSTDSANAICNIL
ESIFLHGCKPPVSKKIANYIGINQGYENGAQQINFWMFCERFTHSDVIAQLKRLAQVNSE
IGLCRAWIRVALNDGLMESYVNAMMADKKSLEYFYSSTSYFRDHEQPEIFLSYLKGLMLY
EFRLSYNSSVLNNWPNSSLVMAGLIDAENTPLPVIHPQRASLKKNETERRDVGVESIHPI
NRQKSKSKKRTSLEEGGESSLPQGKSVSEYSSELTQEDVDKIRGMKPRNKSRSECSSSSR
VSCPDPVKYNKNPALYVADRGKDDEPMFDLGDDADVSGQDIGNNDLQSKEHIDEEIDPMF
SSDNPHLGSDLSSPDKPSLNDPSSYGEFSYSSVSGELLDSKDLEEDTFLDSEGSGLPVSP
MGVNGYEDMRECIEETNKADSPFEETQPVMISENKPSDFPVSPQQQDFVNERILQDILNT
ELGSPSDKRDKKITSDSSCDNSYTGSPQDENKVRRKSRSRRENLKPEFGAGTRNIVQPQL
SPAVADAIETTMMDQTTQKRFSISDTEVSEQASSSPRRPRSGALSVCLEPENDEGIGIAS
PPSIGNSLGAKSGWSSDFDQPTQSHAVSGTMPLRNKSESFNSLLKSYTPSSQVASPTMAD
VLQELPEQTDFSPSSPEVDRRISDPQEEDFEIIGDLDSEGSERDPNNQTLLLGVITTEKG
LDAQNYQCGSCKRPIGFIYGKPRVCTFDGKYYCFECHENDEYYIPALIIHNWDFRKHIVS
KKSLTFLQDVEDHSVIDISSVNPKLYEHITEMGQLQELRKQLCHLKTYLFTCKQSIADEF
RKSMWPKEYLYEGVHNYTLADLLQVPSGQLAQSLKKSIKFATKHVFECPLCSGKGFICEL
CHNPKVIYPFQTDDTIRCSKCKSVFHKSCKLDSKSCPKCERRNKRKSKSGDTLETPDIHD
YAFSPQFVS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtttaaaagaaaaggtccaactccggtagaagttgctcaagaaaatgatatc
aaacaaaacatcacaaaggaactctctacagctgtcaagaagctccaacaggagcaacaa
ctgaactcggatgaaccaatcctcagcactgattcagcaaatgcaatttgtaacattctt
gaaagcatcttccttcatggctgtaagccgccagtttccaaaaagatagcaaattacatt
ggtataaatcagggatatgaaaatggagcccaacaaattaatttctggatgttttgtgag
cggtttacccacagtgatgttatagctcagttgaaacggttagctcaggtcaactcagag
attggtctgtgcagggcctggattcgtgttgcgctcaacgatgggttaatggagagctat
gtgaatgccatgatggcagacaagaaatccctggagtacttttatagcagtacatcttat
tttagagaccatgaacagcctgaaatatttctttcctacttaaaaggtttaatgttgtac
gagttccggctttcctacaactccagtgtgctaaacaactggccaaactcctccctcgtg
atggcggggctaattgacgcagagaacacgccccttcctgttattcatcctcaaagagca
agcctaaagaaaaatgagacagaacggagagatgtcggggtcgagtccatacatcccatc
aaccgacagaagagcaagtccaaaaagaggactagtctagaggagggaggggagtcatct
ctcccccagggaaagtctgtctcagaatacagctctgaactgacccaggaggatgtggac
aaaattcgaggaatgaaaccaagaaacaaaagtaggtccgagtgttccagttccagtcga
gtatcctgccctgacccagtgaaatacaataagaaccctgccttgtatgtagcagacagg
ggaaaagacgacgagcccatgtttgatttaggtgatgatgcagatgtctcaggtcaggat
attggtaacaatgatttacaaagcaaagaacatattgatgaagagattgatccaatgttc
tctagtgataatccccacctgggttcagatcttagttctccagacaaaccctccttaaat
gaccctagctcttatggagagtttagttactccagtgtttcaggagagcttttggacagt
aaggacttagaagaagacactttccttgattctgagggatcgggacttcctgtaagtccg
atgggagtaaatggatatgaggacatgcgtgaatgtatcgaagaaacaaataaagctgac
agtccatttgaggagacccagccagtcatgatctcagagaacaaacccagtgatttccca
gtcagtccgcagcagcaagactttgtgaatgagcgaatcttacaggacattctcaacaca
gaactgggtagtccaagtgacaagagagataagaaaattacgagtgattcttcatgtgat
aacagttacactgggtctccacaggatgagaataaagtgaggagaaagtcgaggagtagg
agagagaacctgaagccagagttcggtgcagggaccaggaatattgttcagcctcagctc
tccccagcggtcgccgatgctattgagacaaccatgatggatcagaccacacaaaaaagg
ttctctatcagtgacacagaggtcagtgagcaggcttcctcatcaccaagacgaccaaga
tctggtgccctgtcagtttgcttggaaccagaaaatgatgagggcattggaattgcttca
ccgcccagtataggaaatagcttgggtgccaaaagtggatggtcctcagactttgatcaa
ccaacccagtcccatgcagtgtctggcacaatgcctctcagaaataaatctgagagtttt
aactccctgctgaagagttacaccccctccagccaagttgcttcccctaccatggccgac
gtacttcaggagctcccagagcagactgacttctccccttcatccccagaggtggatcga
agaatttctgaccctcaggaagaagactttgaaataatcggtgaccttgactcggagggc
tcagagagagatcccaataaccagactttgttacttggagtgataaccacagagaaaggc
ctggatgctcaaaattatcaatgtggcagctgtaaaagacccattggattcatctatgga
aagccgcgagtatgtacctttgatgggaagtactactgctttgagtgtcatgaaaacgat
gagtactacattcctgccctgatcatccacaactgggacttcaggaaacacatcgtttcc
aagaaatccctgacttttctacaagatgttgaagatcattctgtcattgacatttcttca
gtgaatcccaaactgtacgaacacatcacagaaatgggccagctacaggaattgagaaag
cagctctgccatttaaagacatacttgttcacatgtaaacagtccattgctgatgaattt
cggaaaagcatgtggccaaaagaatatttatacgagggtgttcataattatacactggct
gacttgctgcaagtgccatcaggacagctagctcagagcctgaagaagtccatcaagttt
gcaacaaagcatgtgtttgagtgccccttgtgtagtgggaagggctttatctgtgaactc
tgtcacaaccctaaggtcatctatccattccagactgatgataccatcaggtgttccaag
tgtaaatctgtattccataagtcttgtaaactggattccaaatcctgccctaaatgtgaa
cgacgaaacaaacggaaatcaaaatcgggggatacccttgagacccccgacattcatgac
tacgccttctcgccccaatttgtctcttga
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