Magallana gigas (Pacific oyster): 136275819
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Entry
136275819 CDS
T03920
Name
(RefSeq) actin-1-like
KO
K05692
actin beta/gamma 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03082
ATP-dependent chromatin remodeling
crg04145
Phagosome
crg04814
Motor proteins
crg04820
Cytoskeleton in muscle cells
crg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136275819
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
136275819
09142 Cell motility
04814 Motor proteins
136275819
04820 Cytoskeleton in muscle cells
136275819
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
136275819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
136275819
03019 Messenger RNA biogenesis [BR:
crg03019
]
136275819
03036 Chromosome and associated proteins [BR:
crg03036
]
136275819
03029 Mitochondrial biogenesis [BR:
crg03029
]
136275819
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crg04812
]
136275819
04147 Exosome [BR:
crg04147
]
136275819
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136275819
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
136275819
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
136275819
NuA4 complex
136275819
Chromatin remodeling factors
BAF complex
136275819
PBAF complex
136275819
GBAF(ncBAF) complex
136275819
SWR1 complex
136275819
Mitochondrial biogenesis [BR:
crg03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
136275819
Cytoskeleton proteins [BR:
crg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
136275819
Exosome [BR:
crg04147
]
Exosomal proteins
Proteins found in most exosomes
136275819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
Motif
Other DBs
NCBI-GeneID:
136275819
NCBI-ProteinID:
XP_065941934
LinkDB
All DBs
Position
5:46047209..46050345
Genome browser
AA seq
380 aa
AA seq
DB search
MPINLVEDDIACVVIDNGSGMCKAGFAGDDAPRAVFPAVTGRPRYDIVMAGMGGKDCYIG
DEAQSHRGVLSLNYPVEHGVVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKYN
REQMTQIMFETFNVPGFYVSIQAVLSLYGAGRTTGIVFDSGDGVSHIVPIYEGYALPHAI
KRVDLAGRDLTKYLQRILHERGYNFVNSSEQEIVRDIKENLCYVAMDFEQELCASAQSSA
LEKSYELPDGQVITIGNERFRCPEVLFQPSFTGLEASGIHEQIHNSIMACDIDIRRDMYS
NIVLSGGSTMFPGIKDRLAKEVTAVSPSSMKVKISAAPERKYSVWIGGSILGSLSTFQQM
WITKQEYDECGPGIVHRKCF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcctattaacctggttgaggacgacattgcctgtgttgtgattgacaatgggtcgggc
atgtgtaaggcgggctttgccggagatgacgccccgcgggccgtgtttcccgccgtcacc
ggacgacctagatacgacattgtaatggcgggaatgggaggcaaggattgctacatagga
gacgaggcccagagccaccggggagtcctgtccctgaattacccagtagaacatggcgtc
gtcaataactgggacgacatggagaagatctggcaccacacgttctacaacgaactaagg
gtggctcccgaagaccacccggtgctgctgactgaggcaccactcaatcccaaatacaac
agggaacaaatgacgcagattatgtttgagacgttcaacgtgcccgggttctacgtcagc
atccaagccgtcctctctctgtacggcgccggaagaacgacaggaatcgtgttcgattca
ggagacggtgtgtctcacatcgtccctatatacgaaggctacgctcttccacacgctatt
aagagagtggacctagcaggcagagatctgaccaagtatctacaaaggattctacatgaa
cgaggatacaattttgtcaactcttccgagcaagaaatcgtccgtgacatcaaagaaaac
ctctgttacgttgctatggattttgaacaagaactctgtgcctctgcacaatcctccgcc
ctggaaaaatcttacgaacttccggatggtcaagtgatcaccattggaaacgagcgtttc
cgatgtccggaagtgctgttccagccatcctttacaggtctagaagcgagtggaatacac
gaacagatccacaactccatcatggcgtgcgacattgacatcagaagagacatgtacagt
aacatcgtgttgtcagggggctccaccatgtttccggggatcaaggacagactagccaaa
gaggtcacggccgtctctcccagttcaatgaaggtcaagatcagcgccgcgccagagcgg
aaatactcagtgtggatcggcggatctattctaggttctctgtccactttccaacagatg
tggatcaccaaacaggagtacgacgaatgtggaccaggaatagtgcacaggaaatgcttt
tga
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