Chroicocephalus ridibundus (black-headed gull): 134512914
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Entry
134512914 CDS
T10910
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134512914 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
crid04990
]
134512914 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
crid04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
134512914 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
134512914
NCBI-ProteinID:
XP_063184862
LinkDB
All DBs
Position
3:complement(37281986..37485642)
Genome browser
AA seq
1668 aa
AA seq
DB search
MARIRWGFLLLAACALLSSALAASEKGRLRRITYVLQPGRAGSSGSRHQRPTLLGGEQQQ
QRTFNVQLNTRYSGGTGSGTLERTRRMSKPGGAGVQLRLGPAGQVHPNSAAHAASFAKPA
RFGPRPKAPPGPHGNSSSAGLPLRQKHQLPPPPGVNVCGGQCCHGWSKATGSQRCIKPNC
APPCQNGGMCLRPQLCVCKPGTKGNSCEDTVMQDTSSTGGRSPAVPPWPIPQQAAQQTFS
QKVQVPPKVGPMTQMAFTIKQKPPVGLPQQMQPQMIPLSSQTLMMNLHHGQTQEYVIKPK
YYPVKKVISGEQSTEGSLPLRLGQDQLASPFQLGNHTGRIKVVFTPSICKVTCTKGNCQN
NCEKGNTTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNYTGKLCQI
PVHAANTPKLYHHPQQVNKPVGSQIIHSTHTLPLTMSGQQGVKVKFPPNIVNIHVKHPPE
ASVQIHQVSRIDSTSTGQKAKVPQPGHPQVSYQGLPYQKTQKGHTTYTNQQPIPHMFPVS
VKTQLGRCFQETIGTQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPSYHGYSPMME
CPQGYKRINATFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGFVPDPTLSRCIPDNPI
VAEEKGPCYRFVSAGKQCMHPLSVQLSKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPG
GMGYTVSGPHRNKLYHHPAVRVQPPVIGKTPITQPVAKGTSPPPLPAKEEPVEALTFSQK
SETEMAVQEVATAAPDQELASLDQEKQPDLEPGQPQLSPGISTINLHPQYPVVIEKTSPP
LPVEVAPEISTSSASQVIAPTQVTEINECTVNPDICGAGHCVNLPVGYTCICYEGYRLND
QQTKCSDINECNEAPHLCSLGRCENTEGSFLCICQAGFMASEDGTDCVDFDECSRPHTCG
EGFCVNTVGSYRCEYCDSGYQMSRRGECEDIDECLTPTTCPDAQCINAPGSYQCIPCRLG
FQGWNGQCHDIDECQYGNLCTNGRCENMEGSFRCICGQGFKLSASEDQCEDIDECQHRSL
CTNGRCRNTEGSFRCICSQGYTLSSAGDQCEDVDECLQDSDVCHGGNCMNTDGSYKCTCP
EGFQQIANRGCQDINECERSDLCSPHGECLNTAGSYQCICERGFSVSTDGRTCEDVDECE
NGTVCGSHGFCENMDGSYRCLCYQGYQDSQDGQGCTDVNECEMLSGVCGEALCENVDGSF
LCLCSDENQEYDPMTGQCRFRASPELPIEADQHEDGKKECYYNLNDANFCDNVLTSNVTK
QECCCTLGAGWGDNCEIFPCPVFGTAEFTDLCPEGKGFIPSGESSYGLLAQNYKDADECQ
LFGQEICKNGFCLNTQPGYECYCKQGTYYDPVKLQCFDTDECQDPNSCIDGQCINTEGSY
NCFCTHPMVLDATEKRCIRPADSSEQTEETEVYQDLCWQHLSDDFVCSRPLVGKQTTYTE
CCCLYGEAWGMQCALCPMKESEDYAQLCNIPVPGSRRPYGQDALVDFEEHYTPETNPYFV
EDRFLNSFEELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDMAKMTCVDVNECNEL
NNRMSLCKNAKCINTEGSYKCLCLPGYVPSDKPNYCTPLNSQLDSELE
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatcagatggggcttcctcctcctcgccgcctgtgcacttttgtcatcagcg
ctcgctgcctccgaaaagggccggctgaggaggatcacctacgtcctgcagcccggccgg
gctggctcctccggcagccggcaccagcgcccgaccctcctcgggggggagcagcagcag
cagcgcacgtttaacgtacagctgaacacgcgctacagcggcggcaccggcagcggcacc
ctggagcggacccggcggatgagcaagccgggaggcgcgggcgtacagctccgcttgggc
cccgccgggcaggtccaccccaactccgctgctcacgccgcctccttcgccaagccggcc
cgcttcggcccgcggcccaaggcgccgccgggcccccacggcaacagcagcagcgccggc
ctgcccctccgccagaagcaccagctgccgccgccgccgggggtgaatgtgtgcgggggg
cagtgctgccacggctggagcaaggccacgggctcccagaggtgcatcaaaccgaactgt
gcaccaccatgccaaaatggagggatgtgcctgcgacctcagctttgtgtgtgtaaacca
ggaacaaaaggtaattcctgtgaggatacagtcatgcaagacacatcttccactggaggc
cggagccctgctgttcccccatggcccataccccagcaggctgcccagcagaccttctct
cagaaggtgcaggtcccaccgaaggttggccctatgactcagatggcattcaccatcaag
cagaagcctcctgttgggttacctcagcaaatgcaaccacagatgatacccctttcgtct
cagacactgatgatgaatcttcatcatggccaaacacaggaatatgtgatcaaacctaaa
tattatccagtaaaaaaagtaatttcaggagaacagtccactgagggctcgttaccgctg
agactgggccaggatcaacttgcatcaccttttcaattgggaaatcacactggtcgcatc
aaggtggtctttacacccagcatctgtaaagtgacttgtaccaaaggcaactgtcagaac
aactgtgagaagggaaataccaccaccctcattagtgaaaacggccatgctgctgacact
ctgacagccactaacttccgagtagttatttgccaccttccatgcatgaatggaggacag
tgcagttctagagataaatgccagtgccctcctaattacactggtaaactttgccagatc
cctgtgcatgctgccaatactccaaaactgtaccatcacccacaacaggtgaataagcct
gtaggatcacaaattatccactctactcatactttaccactgacgatgtctggacagcag
ggtgtaaaagtgaagttccctcctaacatagtgaatatccatgtgaaacatccccctgaa
gcatcagttcagatccatcaagtttcaagaattgacagcacatcaacaggacaaaaagca
aaagtacctcagccaggacatccacaggtctcttaccaaggtcttccatatcagaagacc
cagaaaggacatactacttacacaaatcaacaacccattcctcatatgtttcctgtttca
gttaaaactcagcttgggcgctgcttccaggagactatcgggacacagtgtggcaaagca
cttcctggcctttccaagcaagaagactgctgtggaaccgtgggtacttcctggggtttt
aacaaatgccagaaatgtcccaagaagccgtcttaccatggatacagtcctatgatggaa
tgcccacaaggttacaagaggatcaatgctacgttttgtcaagatatcaatgagtgtcag
ttacagggagtatgccctaatggtgagtgcttgaataccatgggcagctacagatgtacc
tgcaaaatgggatttgtgccagatcctactctctcaagatgcatacctgataatcctata
gttgctgaagagaagggaccctgctaccggtttgttagtgcaggaaagcaatgcatgcat
cctctttctgttcagctcagcaagcagctttgctgttgcagtgttggcaaagcctggggc
ccgcactgtgagaagtgtccgctgccgggaacagctgcttttaaggaaatctgccctggt
ggaatgggttatacggtttctggccctcacagaaacaagctatatcatcaccctgcagtt
agagtacagccacctgtcattggcaagaccccgattactcaacctgttgctaaaggtact
tctcctccacctctcccagcaaaggaagagccagtggaggcactgaccttctcacagaaa
agtgagactgagatggctgtgcaagaagtggcaactgcagcccctgatcaggaattagct
tcccttgatcaagaaaagcagcctgatctagagcctgggcagcctcagctttctcctgga
atttcaacaattaacctacatccacagtatccagtagtgattgagaaaacatctcctcct
ctgcctgttgaagttgctcctgaaatctctacttcgagtgcaagtcaagtaattgcacct
actcaagttacagaaatcaacgaatgtacagttaatcctgatatctgtggagcaggacac
tgtgttaatttgcctgtggggtacacttgcatctgctacgaggggtacagacttaatgat
cagcagacaaagtgctctgatattaatgagtgtaatgaggcaccccatctctgttccctt
ggacgctgtgaaaatacagaaggaagtttcctatgtatttgccaagctggattcatggcc
agcgaagatggaacagactgtgttgattttgatgaatgttcaagacctcatacttgcggg
gaaggcttttgtgtaaatacagttggctcatacagatgtgaatattgtgatagtggatac
caaatgagcaggagaggtgaatgtgaagatattgatgaatgcctgactccaactacttgt
ccagatgcacagtgcattaatgctcctggctcttaccagtgcattccttgcagactggga
ttccaaggctggaatggacagtgccatgatatagatgaatgtcagtatggcaatctctgt
acaaatggacgttgtgaaaatatggaggggtcattcagatgtatttgtggccaaggtttc
aaactttctgcatcggaggatcagtgtgaagatatagacgaatgccagcaccgatcactc
tgtacgaatggacgctgcaggaacacagaaggatctttcagatgtatttgtagccaaggc
tacacattatcatctgctggagatcagtgtgaagatgttgatgaatgccttcaagacagt
gatgtttgccatggaggaaactgcatgaatactgacgggtcttacaaatgcacttgtcca
gagggtttccagcagatagcgaatagaggatgccaagatatcaacgaatgtgagagatct
gacctctgttcacctcatggggagtgtctaaacacggctggttcctaccagtgcatatgt
gagcggggcttttctgtgtctacagatggccggacatgtgaagatgttgatgaatgtgag
aatggcacagtatgtggcagtcacggcttctgtgaaaatatggatggctcctaccgctgc
ctctgttaccaagggtatcaggactcacaggatgggcaagggtgtacggatgtgaatgaa
tgtgaaatgctgagtggagtatgtggcgaagctctctgtgaaaatgtcgatggttctttc
ctgtgcctgtgctctgatgaaaaccaggagtatgatccaatgaccggacagtgtcgcttc
cgtgcctcaccagaattaccaatagaggctgatcaacatgaagatggaaagaaggagtgc
tactacaatctgaacgatgctaatttctgtgacaatgtgctcacgtccaatgtaaccaaa
caagaatgctgctgtaccttgggtgctggctggggtgataactgtgaaatcttcccatgc
cctgtctttggaactgctgaatttactgatttgtgtcctgaaggaaaaggtttcattccc
tctggagaatcatcttacgggcttcttgctcagaattacaaagatgctgatgaatgccaa
ctctttggacaagaaatctgtaaaaatggtttctgtttgaatacacagccaggttacgag
tgctactgcaaacaaggcacatactatgaccctgttaagctccagtgctttgacacggat
gaatgtcaggacccaaacagctgtattgatggccagtgcattaacacagaaggatcttac
aactgtttctgtacacacccaatggttctggacgcaacagaaaagcgatgcatcagacca
gcagattcaagtgaacaaactgaagaaactgaggtctaccaggatctttgctggcagcat
ctaagtgatgattttgtctgtagtcgacctctggttggaaagcagactacatatactgag
tgctgttgcctatacggtgaagcctggggcatgcagtgcgcactgtgtcctatgaaagag
tcagaggattatgcccagctgtgcaacattcctgttccaggatctcgacggccatatgga
caagatgctttggttgacttcgaggagcactacactccagaaactaacccatactttgtt
gaagaccgttttctgaacagctttgaggagttacaagcagaggaatgtggtattctgaat
ggatgtgaaaatggccgatgtgtaagagtccaagaaggctacacctgtgactgctttgat
ggttatcacctggacatggccaaaatgacttgtgttgatgtgaatgagtgcaacgagctg
aacaacaggatgtctctctgcaagaatgccaaatgcattaacacagaaggttcgtacaag
tgtttgtgtctcccagggtacgtaccttcagacaagccaaactactgcacaccactgaac
tcacaactagacagtgaactggagtag
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