Chroicocephalus ridibundus (black-headed gull): 134513008
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Entry
134513008 CDS
T10910
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid00900
Terpenoid backbone biosynthesis
crid01100
Metabolic pathways
Module
crid_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
134513008 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
crid01006
]
134513008 (GGPS1)
Enzymes [BR:
crid01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
134513008 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
134513008 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
134513008 (GGPS1)
Prenyltransferases [BR:
crid01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
134513008 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
134513008
NCBI-ProteinID:
XP_063185070
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All DBs
Position
3:complement(46595746..46616602)
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AA seq
299 aa
AA seq
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MDGMDETSKRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASL
LVDDIEDNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLE
LHKGQGLDIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNTLG
LFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENI
DIKKYCVHYLENVGSFEYTRNTLKELESEAYKQIESLGGNPELVALVEQLSKMFKETEN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatggatgaaacatctaaaagaatcctagagccataccagtatttacttcaa
ctaccaggtaagcaagtgagaaccaaactgtcacaggcctttaatcactggctgaatgtt
ccagaagacaaaatacaggttatcattgaagtgacagagatgttgcacaatgcaagcctg
cttgtggatgatattgaagataactcaaagctacggcgaggctttccagtggcacacagt
atctatggaattccgtctgtaatcaactgtgctaattatgtgtatttccttggtttagag
aaggttttaacccttgatcatccagatgctgttaaagtttttacccgtcaacttctggaa
ctccataaaggtcaaggcttggatatttactggagggatacttacacctgtcctacagaa
gctgaatataaagctatggtactgcaaaagacaggcggtctctttggattagctgtaggc
ctcatgcagctgttctctaattataaaaaagacctaaagccgcttcttaacacacttggc
ctcttcttccaaataagagatgactatgccaacttgcactccaaagaatatagtgaaaac
aagagtttttgtgaagacttaactgagggcaagttctcgttcccaaccattcatgcaatt
tggtcaagacctgaaagtactcaggtgcaaaacattttacgtcaaaggacagagaacata
gatataaaaaaatactgtgtacattaccttgaaaatgtgggttcctttgagtacactcgg
aatacattgaaagagcttgaatctgaagcctataaacaaattgaatcacttgggggaaac
cctgagcttgtagcgctggttgaacagctgagcaaaatgttcaaagaaactgaaaattaa
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