Chroicocephalus ridibundus (black-headed gull): 134513290
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Entry
134513290 CDS
T10910
Symbol
DSE
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
crid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
134513290 (DSE)
Enzymes [BR:
crid01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
134513290 (DSE)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4962
SYF2
DUF6400
Motif
Other DBs
NCBI-GeneID:
134513290
NCBI-ProteinID:
XP_063185813
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Position
3:complement(75315969..75352942)
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AA seq
957 aa
AA seq
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MRTHTRGAPSVFFIQAVCFAFAYGAREDAMVPFVNANYDSYPMLYFSKGDVEALRLQAAT
THQHIAARLIEAVQTMLSNPLEYLPPWDPKEFSARWNEIYGNNLGALAMFCVLYPENIEA
INMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYSYLSKTQQERFLEVIA
NASGYMYETSYRRGWGFQYLHNHQPTNCVALLAGSLVLMNQGYLQEAYLWTKQVLAIMEK
SVVLLQEVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFSHPWLKQHFAFMYRTVL
PGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLAEQIRRNRVVEGPGTPSKGQ
RWCTLHTEFLWYDASLRSIPPPDYGVPKLHYFEDWGVVTYGSALPAEINRPFLSFKSGKL
GGRAIYDIVHKNKYKEWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFFNN
VLMFSPAVSKSCFSPWEGQITEDCSSKWLKYKHDLAGDCQGRVVAAMERSGVVFIRGEGV
GAYNPKLKLRKLQRNLILLHPQLLLLVDQIHLEDDSPLEAATSFFHNVDVPFEETVVDDV
HGAFIRHRDGIYKMYWMDDTGHSEKATITSRMYPRGYPYNGTNYVNVTTLLRHPVTRAIY
LFIGPSVDVQSFTVRGDSPQLDVFITTSEHAYAVYLWPVEDGSRSPFAQVIADRQKIVFD
RASAIRSSAVPEVKDYVGIVERNLQHFKPVFQQLEKQILSRVRNTASFRKTAERLLRFSD
KRQTEEAIDRIFAISQRQQQQHGKAKKNRKVAKGYKFVDAVPDIFAQIEVNERKVRQKAQ
TQAQKELPVDEDEEMKDLLDFADITYVKHKTGVSIKGRSGLAQMVTTARSSAPSISASYT
RLFLILNIAIFFVMLAMQLTYFQKAKRLHGQRCLYAILLVDSCILLWLYSSCSQSQC
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcacacacggggagccccaagtgtgtttttcatacaggcggtttgcttcgcc
ttcgcctacggcgccagggaggacgcgatggttccttttgtcaatgccaactatgacagc
taccccatgctctacttctccaaaggggacgtggaggccctgcgtctccaggctgccacc
acgcaccagcacatcgcagctcggctgatcgaggcagtgcaaacgatgctgtcgaatccc
ctggagtaccttcctccctgggacccaaaggagttcagtgctcggtggaatgaaatttac
ggcaacaacctcggggccctggcgatgttctgtgtgctctaccctgaaaacatcgaggcc
atcaacatggccaaggattacatggagaggatggcagctcagcctagttggctggtgaag
gatgccccatgggatgaggtccctctcgctcactccttagttggttttgccactgcgtat
gacttcttgtacagctatcttagcaagactcaacaggagagatttcttgaggtaattgcc
aatgcctcgggatatatgtacgaaacatcatacagacgtggatggggcttccagtacctc
cacaaccaccaacctaccaactgtgtggccctgctggctggaagcctggttctgatgaat
caaggctaccttcaggaagcttacttgtggacgaagcaagtgttggcaatcatggagaag
tcagtagtcctgctgcaggaagtcacagatggctccctctatgaaggggtggcttacggc
agctacacgaccaggtcgctgtttcagtacatgtttcttgttcaaaggcactttgatatc
aatcacttcagccacccctggctcaagcagcactttgcgtttatgtacaggactgtcctg
ccagggtttcagagaactgtggccattgcggattccaactataactggttctacgggccg
gagagccagctggtgtttctcgacaaatttgtcatgcgcaacggcagcgggaactggttg
gcagagcagatcagaaggaaccgagtggtggagggcccggggacaccatccaaagggcag
aggtggtgcactctccacactgaatttctctggtatgatgcaagtttgcgctccatacct
ccgccagattatggggttcctaagctgcattactttgaggactggggagtggtaacctat
ggaagtgctttgccagctgaaatcaacaggcctttcctttccttcaagtcaggaaagctg
ggaggacgtgcaatatatgatattgttcataagaacaagtacaaagagtggatcaagggg
tggaggaactttaatgctggccatgaacacccggaccagaactcctttacttttgctccc
aatggcgtacctttcataacagaagctctgtatgggccaaaatatactttttttaataat
gtgttgatgttttcccctgccgtgtccaagagctgcttctccccatgggaagggcagatt
acagaagactgttcctcaaagtggcttaaatataaacatgatttggctggtgactgtcag
ggacgagtggttgccgccatggagcgcagcggggtggtttttatcaggggagaaggagtg
ggtgcatacaatcctaaactgaagctaagaaaattgcaaagaaacctcatacttctccat
ccccagcttctcttgctagtggaccaaatccatctagaagatgacagccccctggaggca
gcaaccagtttcttccacaatgtggatgtgccttttgaagaaacagttgtagatgatgtc
catggggcctttattaggcaccgtgatgggatatataagatgtactggatggatgacact
ggccacagcgagaaagctaccatcacctcaaggatgtatccccggggctatccatacaat
ggaacaaactacgtgaatgtaacgaccctgttgcggcaccccgtcacgagggccatttac
cttttcattgggccctccgttgatgtgcagagcttcaccgtccgtggagattctccacag
ctggatgttttcattaccaccagtgagcacgcctacgccgtctacctgtggcctgttgag
gatgggtcccgctctccctttgcacaggttattgcagaccgccagaaaattgtctttgac
cgagcctctgccattaggagctccgcagtgccagaagtgaaggactacgtagggatagtg
gagaggaacctgcagcattttaagcccgttttccagcagcttgagaagcagatcttgtct
cgtgtacgcaacacggctagcttcaggaagaccgctgagcgcctgctgaggttttcagat
aagagacagacagaggaggccattgataggatatttgcaatctcacagaggcagcagcag
cagcacggcaaagcaaagaaaaacagaaaagtagccaaaggctacaaatttgttgatgcc
gttcctgacatttttgcacaaattgaggtaaatgaaagaaaagtgcgacaaaaggcacag
actcaagcacaaaaagagttgcctgtagatgaagatgaggaaatgaaagatcttctggat
tttgcagatatcacttatgtgaagcacaaaactggggtgtcaatcaaaggccggtcaggg
ctggcacagatggtgacaactgctcgaagtagtgccccatcaatatcagcttcttatact
cgcctctttctaattctcaacattgctattttttttgtcatgttagcaatgcagctcacg
tattttcagaaggccaagagactgcatggccaaagatgtctgtatgcaatacttttagta
gacagctgtatattattgtggctgtattcttcctgttctcagtcacaatgttag
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