Chroicocephalus ridibundus (black-headed gull): 134513693
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Entry
134513693 CDS
T10910
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
Membrane trafficking [BR:
crid04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134513693 (OTOF)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134513693
NCBI-ProteinID:
XP_063186843
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Position
3:128480542..128606551
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AA seq
2017 aa
AA seq
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MALLLQLRTASGLRGRADRIAKAAFRGLSFYTRVLENCEDEARFDETFRWPVASNIDGNE
ILEIQVFNYSKVFTNRLIGTFRMVLQKVVEEGQVEVTDTLIDDNNSAIQTSISIEIRYQA
LDGTVGTWNDKEFLETPSVHSEGDGRYPLETDSLLSGHRQGSDISPGKSNQQSAERSFRR
AGKGVFSAMKLGKTRPSKDDHRKQDEPAVLEAEDLDRKAVRQGCGLEPDTISLASVTAVT
TNVSNKRSKPDIKMEPSAGRPMDYQVSVTIIEARQLVGLNMDPVVCVEVGEEKKYTSMKE
STNCPYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGSFKMDVGTVYTQPEH
QFYHKWAILSDPEDLTAGLKGYLKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPDGV
PPERQWARFYIKIYRAEGLPRMNASIMANVKKALIGENKDLVDPYVQVVFAGQKGKTSVQ
KSSYEPLWNEQIVFTEMFPPLCKRIKIQIRDSDKVNDVAIGTHFIDLRKISNEGDKGFLP
TFGPAWVNMYGSTRNYTLMDEHQELNEGLGEGVSFRARLLMSLAVEILDTTNPEINSSTE
VQVEQAPSVADNCTGKMEEFFLFGAFLEATMIDRKIGDKPINFEVTIGNYGNQIDGMTKP
TLRRKKEGGDGQEEESELLQNSSEDEGDEDGELVSVSSSQPVKPLVTDRNYFHLPYFEKK
PCIYIKSWWQDQRRRLYNANIMDKIADKLEEGLNDVQEMIKTEKPHPERRLRGVLEELSS
GCLRFVTLADKDQHHSSRTRLDRERLKSCMRELENMGQQATTLRSQVKKNTMKDKLKLAQ
NFLQKLRFLADEPQHTIPDIFIWMMSNNKRIAYARVPSKDILYSIVDEEMGKDCAKVKTL
FLKLPGKRGFGPAGWTVQAKMEMYLWLGLNKQRKDFLSGLPCGFEEKKTARGQNLPSFPP
ISLLYTKKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFISQSQCTEVLNETLCPTWDQ
LLVFDNVELYGEAHEMRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMSDEHYCPPRF
PPQLEYYQIYRGNSTAGDLLAAFELLQIGPGGKSDLPPIDGPTDMDRGPILPVPLGIRPV
LSKYRVEILFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIQNYKKNPNFCTLVKWFE
VDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVSSLRKFIYRPPDKKAQHWNMTAKHLN
GYLAMANGAHRSRPTGEIVVNMEPEVPIKKMETMVKLEANSDAVVKVDVSEEEKEKKKKK
KKGGGGGEEVEEEEPDESMLDWWSKYFASIETMKEQLRQQEAAAAEAEEKEEMEIAEEIK
LDDSPMKGSKGQGKNKEKSKAPKDDKKKKQQSAPELPEKKNKQKIDELKVFNKELETEFD
NFEDWLHTFNLLRGKTGDNDDNATEEERIVGRFKGSMCVYKVPLPDDITKEAGYDPNFGM
FQGIPSNDPINVLVRVYIVRATDLHPADINGKADPYIAIKLGKTDIKDKENYISKQLNPV
FGKSFDIEATFPMESMLTVAVYDWDLVGTDDLIGETKIDLENRYYSKHRATCGVSQTYSI
HGYNTWRDPMKPSQILSKLCKEGKVDGPHFGPGGRVKVANRVFTGPTEIEDENGQKKQTD
EHLALTVLRHWEDIPRAGCKLVPEHVETRPLLNPDKPGIEQGRLEMWVDMFPMDMPAPGP
AIDISPRKPKKYELRVIVWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHY
HSLTGEGNFNWRYIFPFDYLMAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSA
DDFLGAIELDLNRFPRGAKTSKQCSLEMVTNEAELPMVSIFKQKRVKGWWPFVARDENDE
LEITGKVEAELHLLTAEEAEKSPAGLARNEPDPLEKPNRPDTSFIWFLNPLKSIKYLICT
RYKWLIIKIVLALLLLIMIALFLYSMPGYMVKKLLGA
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggccctgctgctgcagctccgcaccgcctccggcctccgcggcagagccgaccgcatc
gccaaagcggctttccgagggctctccttctacacccgagtgcttgagaactgcgaggac
gaggccaggtttgacgagaccttccgctggccggtggcaagcaatatcgatgggaatgag
atcctggagatccaggtgttcaactacagcaaagtcttcaccaacaggctcattggcaca
ttccggatggtcctgcaaaaggtggtggaggaagggcaggtagaggtgacggacacactc
atagacgacaataattcagccattcagaccagcatctccatagagatcaggtaccaggct
ctggacgggacggtgggcacctggaatgacaaggagttcctggagacccccagcgtccac
tcagagggggatggcaggtaccctctagagacagacagcctcctctccggccaccggcag
ggctcggacatctccccgggcaaatccaaccagcagtctgcagagaggagcttcagaaga
gccgggaaaggagttttttcagccatgaagcttggcaagacacgtccatcaaaggatgac
catcggaagcaagatgaacccgctgttttggaggcggaagacctggaccgaaaagccgtg
agacagggatgtggactggagccagacaccatctccttggcctccgtcacagccgtcacc
accaatgtctcgaataagaggtccaagcctgacatcaaaatggagccgagtgctgggagg
ccaatggattaccaggtcagcgtcaccatcatcgaggcccggcagctggttgggctcaac
atggaccccgtggtctgcgtggaggtcggagaggagaagaaatacacgtccatgaaggaa
tcgaccaattgcccttactacaacgagtacttcgtcttcgatttccacgtccccccagat
gtcatgttcgacaagatcatcaagctgtccgtgatccactcaaaaaacctcctgcggagt
ggcactttggtagggtccttcaagatggacgttgggactgtttatactcagcctgagcac
cagttctaccacaaatgggccatcctttctgaccccgaggatctcaccgccgggctgaaa
ggttacctgaagtgtgacatcgctgtggtagggaaaggggacaacatcaagacgccacac
aaagccaatgagacggacgaggatgatatcgaagggaacctcctcctcccggacggggtc
cctccggagaggcagtgggctcgtttctacatcaagatctatcgagcagaggggctgccc
cgtatgaacgccagcatcatggccaatgtgaagaaggctctcattggggagaacaaggac
ttggtggatccctacgtgcaggtggtctttgcagggcagaaggggaagacatctgtacag
aaaagcagctatgagcctctctggaacgagcaaatagtcttcacggaaatgttcccccca
ttgtgcaagcggataaagatccagatccgagactcagacaaagtcaatgatgtggccatt
ggtacccatttcattgatttgcggaagatctctaatgaaggagacaaaggcttcctgccc
acctttggccccgcgtgggtgaacatgtacggctccactcggaactacaccctgatggac
gagcaccaagagctaaacgagggtctgggtgaaggcgtctccttccgggccaggcttttg
atgagtcttgctgtggagatcttggacaccaccaacccggagatcaacagctccaccgag
gtgcaagtcgagcaggctccatcagttgctgataactgcactgggaagatggaggagttc
tttctctttggagccttcctggaggctactatgatcgacaggaagattggcgacaaaccc
atcaacttcgaggtcacaataggtaactatgggaaccagatcgatggcatgaccaaaccc
acgctacggaggaagaaagagggaggggatgggcaggaggaggagtccgagctgctccag
aactcaagtgaggatgaaggtgatgaggatggagagctggtctctgtttcctcatctcaa
cccgtgaagcccctggtcacagacaggaactacttccacctgccgtactttgagaagaag
ccctgcatctacatcaagagctggtggcaggaccagcgccgcagattgtataacgccaac
atcatggacaagattgcggacaagctggaggaagggctcaacgacgtgcaggaaatgatc
aaaacggagaagccgcatccggagcgccggctccgaggggtcctggaggagctgagcagt
gggtgcttgcgcttcgtgacgttggctgacaaggaccagcaccactcttcccgcacgagg
ctggaccgggagaggctcaagtcctgcatgcgggagctggagaacatggggcagcaagcc
acgactctgcggtcgcaggtgaagaagaacaccatgaaagacaagctgaagctggcgcaa
aacttcttgcagaaactccggttcttggcggacgagccccagcacactattcccgacatc
ttcatctggatgatgagcaacaacaagcgcattgcctacgcccgcgtcccttccaaggat
atcctctactccattgtggatgaggagatgggcaaggactgcgccaaagtgaagaccctc
ttcctcaagctacctgggaagagagggtttggacctgctggctggacagttcaggccaag
atggagatgtacttgtggctgggcctcaacaaacagcgcaaagacttcctgagtggcctg
ccctgtggcttcgaggagaagaagacagccagaggccaaaacctgccgtccttccccccc
atcagcctcctttacaccaagaagcaggtgttccagctgcgggcccacatgtaccaagcc
aggagtttatttgcagccgacagcagtggcctttcggacccctttgcacgagtcttcttc
atctcccagagccaatgcaccgaggttctcaatgagaccctttgcccgacctgggaccag
ctgctggtcttcgacaatgtggagctgtatggagaagcccatgagatgcgggatgaccct
cccataattgtcattgagatctatgaccaggacacggtgggcaaagctgacttcatgggc
cgcacctttgccaaaccggtggtgaagatgtcagatgagcactactgccccccgcgcttc
cccccgcagctggagtactaccagatctaccgcggcaactccacagcaggtgacctcctg
gctgccttcgagctgctccagattggccctgggggcaagtcagacctgcccccaatcgac
ggccccacggacatggacaggggccccatcctgccggtgccactggggattcggccggtg
ctgagtaaatacagagtggagatcttgttttgggggctcagggatctgaagagagtgaac
ctggcccaggtggaccggccccgtgtggacattgagtgtgctgggaagggcgtccagtca
tccctcatccagaactacaagaaaaaccccaacttctgcactttagtcaagtggttcgaa
gtggacctcccggagaatgagctgctccatccacccctcaacatccgggtggtggactgc
cgggctttcgggcgttacaccctggtggggtcccacgccgtcagctccctccgaaagttc
atctaccgcccaccagataagaaagcccagcactggaatatgacagctaaacacctcaac
ggctatctggcaatggccaacggggcccatcgctctcgccccacaggggagatcgtggtc
aatatggaacctgaggttcccatcaagaagatggagacgatggtgaagctggaagctaac
tcggatgcagtggtgaaggtggacgtgtctgaggaagagaaggagaaaaagaagaagaag
aagaaaggaggaggaggaggagaggaagtagaagaggaggagccggacgagagcatgctg
gactggtggtccaagtattttgcttcaattgagactatgaaggagcaactccggcagcag
gaagcggccgcagcagaggcggaggagaaggaagaaatggagattgcagaggaaatcaaa
cttgatgactctcccatgaaaggctccaagggtcaggggaagaacaaggagaagtccaag
gcacctaaggacgataagaaaaagaagcaacagtcagcccctgagcttcctgagaagaag
aacaagcagaagattgatgaactgaaggtcttcaacaaagagctggaaacagagtttgat
aactttgaggactggctgcacaccttcaacctgctccgtgggaagactggggacaacgac
gacaacgcaacggaagaggagcggatagtggggaggttcaaaggctccatgtgtgtctac
aaagtgccgctccctgatgatatcaccaaggaggcaggatacgaccccaacttcggcatg
ttccaggggatccccagcaacgaccccatcaacgtgctggtccgagtctacattgtgcgg
gccacggaccttcacccagctgacatcaatgggaaagccgacccctacattgccatcaag
ctggggaagacggacatcaaagacaaggagaactacatctccaagcagttgaaccctgtc
tttggaaaatcctttgacatcgaggccaccttccccatggagtccatgctgacagtggcg
gtgtacgactgggacttggtggggaccgacgacctcattggagagaccaagattgacctg
gagaaccgctactacagcaagcaccgagctacttgtggggtgtcgcagacttactccata
cacggttataacacctggcgtgaccccatgaagccctcccaaatcctgtccaagctgtgc
aaagagggcaaggtggatgggccgcactttgggccaggaggaagagtgaaagttgccaac
agagtcttcaccggccccacggagattgaggatgaaaatggtcagaagaagcagacagac
gaacacctggccctgaccgtgctgcgccactgggaggacatcccacgggcaggctgcaag
ctggtccccgagcacgtggagacacgtccgctgctgaaccccgacaagccgggcattgag
cagggtcgcctggagatgtgggtggacatgttccccatggacatgccagcgcccggccct
gccattgatatttcccccaggaaaccaaagaaatatgagcttagagtcatagtgtggaac
acagacgaggtcatcctggaggacgatgactacttcactggcgagaaatccagtgacatt
tttgtcagggggtggctgaagggtcagcaggaggacaagcaagacacagatgtccattac
cactccctcaccggtgaaggcaacttcaactggcgctacatcttcccctttgactacctg
atggcggaggagaagatcgtcatctccaagaaggagtccatgttctcctgggatgagacc
gagtacaagatcccagctcgcctcaccctgcaagtctgggatgctgaccacttctcggcc
gatgatttccttggggccatcgagctggacctgaaccgcttcccccggggagccaagaca
tcgaaacagtgcagcctggagatggtgacaaacgaggcagagctgcccatggtctccatc
ttcaagcagaagcgggtgaagggctggtggccattcgtggccagagatgagaatgatgag
ctggagatcacggggaaagtcgaggctgaactgcaccttctgacggcagaggaggcagag
aaatcccccgcagggctggctcgcaatgagcccgatccactggagaaacccaaccgcccg
gacacgtccttcatctggttcctgaacccactcaagtccatcaaatacctcatctgcaca
cgctacaagtggctcatcatcaaaatcgtgctggccctgttgctcctcatcatgatcgcc
ctcttcctctacagcatgccaggctacatggtcaagaagctgctgggagcatga
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