Chroicocephalus ridibundus (black-headed gull): 134516206
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Entry
134516206 CDS
T10910
Symbol
SEPSECS
Name
(RefSeq) O-phosphoseryl-tRNA(Sec) selenium transferase
KO
K03341
O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [EC:
2.9.1.2
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid00450
Selenocompound metabolism
crid00970
Aminoacyl-tRNA biosynthesis
crid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
134516206 (SEPSECS)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
134516206 (SEPSECS)
Enzymes [BR:
crid01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.2 O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase
134516206 (SEPSECS)
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Gene cluster
GFIT
Motif
Pfam:
SepSecS
Beta_elim_lyase
Pyridoxal_deC
Motif
Other DBs
NCBI-GeneID:
134516206
NCBI-ProteinID:
XP_063192223
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Position
5:complement(62168787..62194217)
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AA seq
491 aa
AA seq
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MNAENFGSSERLVTAAYVRQGAQGRRAHELRLRALLEQGKCPEDGWDESTIELFLHELAI
MDSNNFLGNCGVGEREGRVASGLVARRHYRLIHGIGRSGDISAVQPKAAGSSLLNKLTNS
VVLDIIKLAGVRTVTNCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI
TAGFEPVVIENVLEGDELRTDIEAVEAKIKTLGAENILCVHSTTSCFAPRVPDRLEELAV
ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE
SFIQEISKMYPGRASASPSLDVLITLLSLGANGYKQLLKERKEMFSYLSSELKKLADNHN
ERLLDTPHNPISLAMSLKNLDENNDGAVTQLGSMLFTRQVSGARVVPCGSVQTVNNYTFK
GFMSHTNDYPCAYLNAASAIGIKKQDVDVFLKRLDKCLKTSRKESKKGKVVNEISNSNTG
TEQLEGQKIEF
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggagaacttcggctctagcgaacggctggtgacggcggcctatgtgcggcag
ggggcgcagggccgccgggcccacgagctgcggctgcgggccctgctggagcagggaaaa
tgtcccgaagatggatgggatgaaagcaccattgagctgtttctgcatgaacttgctata
atggatagcaataactttctgggcaactgtggtgttggtgagagggaaggaagagtggca
tcaggactcgttgcccgaaggcactacagattgatccatggaattggaaggtcaggtgat
atttctgcagtccagcctaaagctgcagggtctagcctcttgaacaagcttactaattca
gtagttctggatattataaagctggctggtgtccggacagtgaccaattgctttgtggtt
cctatggcaactggcatgagtctaactctgtgttttttaacattgcggcacaagagacca
aaggcaaaatacattatctggccacgtatagaccagaaatcttgctttaagtcaatgata
actgcaggttttgagcctgtggtgatagaaaatgtattagaaggtgatgagctacggaca
gacattgaagcagtggaggctaaaatcaagactcttggtgctgaaaatattctttgtgtg
cattctacaacatcttgctttgctccaagggtacctgataggctggaggaactggctgta
atttgtgctaattatgacattccacatattgtcaacaacgcctatggagttcagtcttca
aaatgtatgcatcttatccagcagggtgctcgagtaggcagaatagatgcctttgttcag
agcttggacaaaaattttatggttccagtaggtggtgctatcattgctggcttcaatgag
tccttcattcaggagatcagcaaaatgtatccaggacgagcatctgcgtctccttcctta
gatgtcctcattacacttctgtctctaggtgccaacggctacaaacagttactgaaagag
agaaaggagatgttttcctatctttcaagtgagctgaagaagctggcagacaaccacaac
gagagactgttagacacaccacataatcccatttccttagccatgtcactgaagaatcta
gatgaaaataatgatggtgctgttacccagcttggatctatgcttttcacaagacaagtt
tctggagcaagggttgttccctgtgggtctgtacaaacagtgaataactacacttttaaa
ggctttatgtcacatacaaatgactatccctgtgcttacctcaatgctgcctcagcaatt
ggaattaaaaagcaagatgtagatgtattcctaaaaagactcgacaagtgtttgaagact
tctagaaaagaatcaaagaaaggaaaagttgtaaatgaaataagtaactctaatacaggc
acagaacaacttgaaggccagaagatagagttttag
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