Chroicocephalus ridibundus (black-headed gull): 134516460
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Entry
134516460 CDS
T10910
Symbol
EGF
Name
(RefSeq) pro-epidermal growth factor isoform X1
KO
K04357
epidermal growth factor
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04010
MAPK signaling pathway
crid04012
ErbB signaling pathway
crid04020
Calcium signaling pathway
crid04068
FoxO signaling pathway
crid04510
Focal adhesion
crid04540
Gap junction
crid04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134516460 (EGF)
04012 ErbB signaling pathway
134516460 (EGF)
04068 FoxO signaling pathway
134516460 (EGF)
04020 Calcium signaling pathway
134516460 (EGF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134516460 (EGF)
04540 Gap junction
134516460 (EGF)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134516460 (EGF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
crid04052
]
134516460 (EGF)
Cytokines and neuropeptides [BR:
crid04052
]
Cytokines
Growth factors (RTK binding)
134516460 (EGF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
EGF
EGF_3
DUF5050
Vgb_lyase
hEGF
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
134516460
NCBI-ProteinID:
XP_063192731
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Position
5:complement(25555659..25618906)
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AA seq
1254 aa
AA seq
DB search
MFLFLVAFLPVVFKIGFVSLSALQHWNCPNGYRLKTENSACIDIDECLEGGLGTCGQTCT
NVPGSYICSCLPGYTLDIDKRSCYVNDPAPFLLFSHGNAIFRIDTEGTNHEILVADAGQS
TLMDFHYAEEKVYWVDSERRLLQRIHLNGTKRERLCYIDKGISGFAIDWINQDILWANRQ
KATIETTDMNGKKRRVLLRDVGRPTRITIDAEQRLLFWSSDGTISSVHRVSLSGSDVRNV
LRTTEKIKAISLDLVDTRLYWIQHDHGKEISHIGSCDYDGRAVHLLKNSVRHQLLGMSLF
AEHLYYSELKSGMIWRANKYTGKVVVTISLKPSFFPPAEIKVVHPFKQPGARTDSHDLEK
GSCGLNKEKCRRRICRPDIRTHRCKCSSGFILSRNKQFCEDINECGFWNHGCTLGCVNIP
GSYYCTCPRGFVLLPDRKTCHELISCASNNTECSHGCLQTSEGPVCFCPEGSILKVDGKA
CTGCTSPDNGGCSQICSSLSPSSWECACFPGYTLQRDRRHCTAIGPKPFLLFANGQDIRQ
ISFDGTDYASLLDWQMGIVLALDSDPVENKIYFAHTALKWIERANLDGSNREKVIHEAID
IPEGLAVDWINRKLYWTDRGKACIERSNLNGMQRKKIIWEDISQPRGIAIHPFAKRLFWT
DMGVSPRIDSSSLEGIDRQVIASTGLVWPSGIALDYLANKLYWCDAKQSVVESANLDGSG
RRILAQNDVGHPFDVAVFEDHLWFSDWARPSLMRVDKKTGQNRVRLRGSMLRPSSMVVVH
PLAKPGANPCLYENGGCDQICENNFGVARCMCHSGFGKTQDGKTCRALNNSNTTTGSVSM
HKEVVPMPTPETLLRSTQSSGIFKDTDSGEKQKISILLMAEIMVSDQDDCTALECDVNAQ
CVLLEDGAMCQCLKGFTRKGKSCYDVDECAVNMDRCNRNVSGCINTEGGYVCKCLEGYTG
DGVHCYDIDECKTGSHTCGENVTCTNTEGNFTCSHADDASGTGVGCKSTVSPPVVSNEYS
THPVQGDSVGCPPSYESYCLHGGVCNYVSDLQDYACNCVTGYVGERCQFSDLEWWEQQHA
ERVKMRNITITVCAAVLVLLLLLGSLAAYCHRSQNLYKKNLYAEVVRDASSRADNENVTP
TSSKSRFAVVKEGNSSLETKAVDLIECETTDPHPACPSEYVEEQPITYDKAAETSAEEEK
EQGCQQEVPVGEKLRQPMGAAKGPPQAPWSTPPKPLLEREPCELAPASLLMQPD
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcttccttgttgcttttttgccagtggtttttaaaattggttttgtcagcctc
tcggctctgcagcactggaactgtcctaatggatacagattaaagactgaaaactctgct
tgtatagatattgatgaatgccttgaaggtggtttgggaacctgtggccaaacctgtacc
aatgttccagggtcctacatctgctcctgtttgcctggctacactttggatattgacaaa
cggtcttgctatgtgaacgaccctgcaccattcctactttttagccatggaaatgccatc
tttagaattgacaccgaagggaccaatcatgaaatattggtggctgatgccggtcagtca
acacttatggattttcattatgcagaagagaaagtgtattgggtagactctgagaggcga
ctacttcaaagaattcacctgaatggcacaaaacgagagagactatgttacatagacaaa
ggcatttcaggatttgctattgactggataaatcaagacattctctgggccaacagacag
aaagcgaccatagaaacgacagacatgaatgggaagaaacgccgagttcttctaagagat
gttggtcgtcccacaaggattaccattgatgctgagcaaaggctattattttggtcttca
gacggtacaatttccagcgtacaccgagtgtccctcagtggaagtgatgtgagaaatgtt
ttaagaaccacagaaaaaataaaggccatctcactagatttggtggacacaaggctctac
tggatccaacatgaccacgggaaagagatttcccatattggatcgtgtgactatgatggc
agagctgttcatttgctcaaaaattctgtccgacatcaattgcttggtatgtccctcttt
gctgagcacctgtactattcagagttgaaatctggtatgatatggagagccaacaagtat
actggaaaagttgtggtcacaattagcctgaagccatcgttttttccaccagcggagata
aaggtggtgcatccatttaaacagccaggtgcaagaacagattctcacgatttggaaaaa
ggaagctgtggtttgaacaaagaaaagtgcagaagaagaatctgcaggccagacataagg
actcatcggtgtaaatgttctagtggctttattttaagtcgaaataaacaattttgtgaa
gatatcaatgaatgtggcttctggaatcacggctgtactttgggctgcgtgaacatccct
ggttcctattactgcacctgcccgagaggttttgttcttctgcccgataggaaaacgtgt
catgagctaatttcctgtgcaagtaacaacactgaatgtagccatggttgccttcaaaca
tctgaagggcctgtttgcttttgtcctgaaggatccatactcaaagtggacggcaaagca
tgcacgggttgtacatctccagataatggtggctgtagtcagatatgttcttctttaagc
ccgtcctcctgggagtgtgcttgttttcctggatatacgcttcagcgagacagaaggcac
tgcactgctataggtcctaagccatttttgttatttgcaaatggccaagatatccgccag
atcagttttgatggaacagattatgcaagtttacttgactggcagatgggaatagtctta
gcactggactctgacccagtggaaaataagatttactttgcccacacagccttgaagtgg
atagaaagagctaatctggatggctcaaatcgtgaaaaagttattcatgaagctatagat
atacccgaaggccttgctgtggactggattaaccgtaaattgtattggacggacagaggg
aaggcatgcatcgaaaggagcaatctgaatggaatgcaaagaaaaaagatcatctgggag
gatatctcccagccccgagggattgccattcacccatttgctaagagattattctggact
gacatgggggtcagtccccggattgacagctcttcattagaaggcatcgatcgccaggtt
atagccagcactggtctggtgtggcccagcggaatagctctcgactacttagccaacaag
ttgtactggtgtgatgctaagcagtcggtggttgagagtgcaaacctggatggttctggt
cgtcgaattcttgcacagaatgatgtaggccacccttttgatgtagcggtgtttgaggat
cacctttggttttctgactgggctaggccatcactaatgagggtggacaagaagaccggc
caaaacagggtacgtcttcgaggcagcatgctgagaccctcatcaatggttgtagttcat
cctttggcgaaaccaggggcaaatccttgcctttatgagaatggaggctgtgatcagatc
tgtgaaaacaattttggagttgctcgttgcatgtgccattcaggatttgggaaaactcaa
gatggaaaaacctgtcgtgctctgaataattccaacacaacaacaggaagtgtctctatg
cacaaggaggtagtgccaatgccaacaccagagaccttgctccggagcacacaaagcagt
ggcatattcaaggatacggacagtggggaaaagcagaaaatcagcattttgttgatggct
gaaatcatggtatcagatcaagatgactgcactgcactagaatgtgatgtcaatgcacag
tgtgttttgctggaagatggtgctatgtgccagtgtttgaaaggatttaccaggaagggg
aaatcatgttatgatgttgatgagtgtgctgtaaatatggaccgctgtaatcgaaacgtt
tcaggctgtatcaatacggaaggaggctacgtctgtaagtgcctggagggctacactgga
gacggagtccattgctatgatattgatgagtgcaagacggggtcccacacctgtggagag
aacgtaacctgcacaaatacagaaggaaacttcacttgctcacatgctgatgatgcttct
gggactggcgtcggttgcaaatctactgtgtccccccctgttgtcagcaatgaatactct
acgcaccctgtgcaaggtgattctgtgggatgccctccttcgtatgagtcatactgcctc
catggcggagtgtgcaattatgtttctgatctacaagactatgcctgcaactgtgtgacg
ggctatgtcggggagcggtgccagttcagcgatctggagtggtgggagcagcagcacgcc
gagcgggtgaagatgcggaacatcaccatcacagtgtgcgcagcagtgctggtcctcctg
ctgctgctgggatccctggctgcctactgccacagaagtcaaaacttgtataagaagaat
ctctatgcagaagtggtaagagacgcgagcagccgcgctgacaatgagaacgtgacacct
actagcagcaagtctcggtttgcagttgttaaggagggtaacagttctctggagactaaa
gcggttgatctaattgagtgtgagacaacagatccccatcctgcctgtccttcagaatat
gtggaagaacagcctataacatatgacaaagcagcagagacttcggcagaagaggagaaa
gaacaaggctgtcaacaagaggttcctgttggtgagaaattgcgtcagcccatgggagcg
gcgaagggccctccccaggctccctggagcacccctcccaagcccctgctggaaagggaa
ccctgcgagctcgccccagctagcctgctgatgcagccagactag
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