KEGG   Chroicocephalus ridibundus (black-headed gull): 134516887
Entry
134516887         CDS       T10910                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crid00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134516887 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crid03041]
    134516887 (SMNDC1)
Spliceosome [BR:crid03041]
 Complex A
  U2 snRNP components
   U2 related factors
    134516887 (SMNDC1)
 Complex B
    134516887 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    134516887 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 134516887
NCBI-ProteinID: XP_063193715
LinkDB
Position
6:11876484..11886817
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNAENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagaccttgctaagcagttggctagctacaaagctcagcttcagcaagttgag
gcagccttatctgggaatgcagaaaatgaagatttattaaaactgaagaaagacttacag
gaagtcatagaattaaccaaagatctcctttcaacacaaccttcggaaactcttgcaagt
tctgacagttctgcttctgctctgcccagtcactcctggaaggttggggataggtgtatg
gcaatatggagtgaggacggacagtgttatgaagctgagattgaagaaatagatgaggag
aatggaacagctgcggtcacatttgctggatatggcaatgctgaagttacacctctgttc
aacctcaagcctgtggaagagggaagaaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgatagctcagcaacgagagtataaaaagaagaaagctttgaaaaaa
gctcagagaattaaagaacttgaacaagaacgagaggaccagaaagtcaagtggcaacag
tttaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcccctgagagcgtaactggcaaggttggagttggaacatgtggaattgcagacaaacct
atgacacaatatcaagatacctctaaatataatgtcaggcatttgatgcctcagtaa

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