Entry |
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Symbol |
PTPRF
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Name |
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
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KO |
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Organism |
crid Chroicocephalus ridibundus (black-headed gull)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:crid00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134519992 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
134519992 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
134519992 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:crid01009]
134519992 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:crid04515]
134519992 (PTPRF)
Enzymes [BR:crid01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
134519992 (PTPRF)
Protein phosphatases and associated proteins [BR:crid01009]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
134519992 (PTPRF)
Cell adhesion molecules [BR:crid04515]
Immunoglobulin superfamily
Type II RPTP family
134519992 (PTPRF)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
8:complement(12513577..12910570)
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AA seq |
1918 aa
MVPNFCVPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSI
PPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIVQSANY
TCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKA
KSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSP
PLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVG
SLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPAS
QERITKYELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTI
EARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKH
VVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEV
ESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDS
VDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTAL
IQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYVFKLSAKNR
AGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRD
INSQQDLVNITKDTSITLTNLKPDTTYDIKVRARTNKGVGPLSPSIQSRTMPVEQVFAKN
FRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVL
MNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVV
PADQSTSSPTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFT
LGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPE
MLWVMGPVLAVILIIIIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLN
YQTPGASVPSCPNISSMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWEN
SNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPE
TLSDFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVELATYT
VRTFALYKNGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCS
AGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAAT
CGNTEVPARNLFAHIQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNR
LVNIMPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWE
HNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARD
GQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVF
ITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT |
NT seq |
5757 nt +upstreamnt +downstreamnt
atggtgcctaacttctgcgtcccagtactcactgtgccagcagccatcctctgctgcttg
atgctgcctttagcaggagcagacagcaagccaacgtttatgaaagctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacatggatgaagaaggggaagaaagtcagttctcagcggtttgaggttattgag
tttgatgatggatcaggatcagttctgcggatacagcccctgcgtgttcatcgagatgaa
gctatctatgagtgcacagcaaccaatagtgttggggagataaacacgagtgccaaatta
acagtgttagaagaagaccacctcccagctggcttcccgaccattgacatgggtccgcag
ctaaaggtggtggaaaaggctcgcacagccacaatgctctgtgctgccagcggtaaccct
gatcctgaaatctcctggtttaaggacttcctgcctgttgacactgcaactagcaatggg
cgaatcaagcagctccgctcgggtggtacaccgatcagaggagctctgcaaatagagaac
agcgaggagtcagaccaaggcaaatatgaatgtgttgcaaccaacagcgcaggaacccgc
tactctgccccagcgaacctttatgttcgagtgcggcgtgttgctcctcgattctctatc
cctccgagcaaccacgaggtgatgccaggggggagcgtgaacctcacatgcgtggcagta
ggtgctccgatgccctacgtgaagtggatggctggtgtggaggaactgaccaaagaagat
gagatgcccgttggtaggaacgtcctggagctgaataacatcgtgcagtctgccaactac
acctgcgtggccatctcttctctcggcatgatcgaagccacagcccagatcactgtcaaa
gcactgccaaaacctccaacagagccattagtgactgaaacgacagctaccagcgtgacc
ctcacctgggattcgggcaactccgaccccatttcatattacgtcatccagtacaaggcc
aaatccttggagggtcagttccaggaggtggatggtgtggcaacaacccgctatagcata
ggtgggctcagccccttctcggagtatgagttccgggtcattgcagtcaataatattggc
aggggtccccccagtgagctggtcgaggcccggacaggagagcaagctccttcaagccca
cccctcaaagtccaagcacggatgctgagcgccagcaccatgctggtccagtgggagcag
ccagaggagccaaatggacagatcagagggtaccgcgtttactataccaccgacccacat
ctgcctttgagcatgtggcagaaacacaacaccgacgacagccatctcaccaccgtgggg
agcctcatcacagggaccacgtacagcatccgcgtcctggcctttacttcggtgggcgac
gggcccccctcggacatcatccaggtcaaaacacagcaaggggttcctgcccagccagct
gacttccaggcagaagcagagtctgatacccgcatcctgttgacgtggctgccagcctct
caggaacgcattaccaaatacgagctgctgtactgggaaggggaggatggcactcagcaa
aaggtggagtttgacccaacatcctcgtatgctgtggaaggtctcaaaccagacacgctg
tataagttccgtctgggtgcccgctcagagctgggggtaggagtctacacccccacaatc
gaagccagaactgcccaatccaccccctccgccccaccccaagaagtcgagtgtgtaagc
accagctccactaccatccgggtaagttgggtgccaccgcctgcccagagccgcaatggg
gtcatcacccagtactccattgcataccaggcagtggaaggagatgacaacaccaagcat
gtggtggatggcattggacgtgagcactccagctgggagatcaaggacctggagaaatgg
accgagtacaaggtgtgggtaagggctcacaccgatgtggggccaggaccggagagcatc
cccgtgcatgtgcgcacggatgaggatgtgcccagtgccccaccacgaaaggtggaggta
gagtctgtgaattcaacggccatccgggtgagctggaagctgcccatctccaacaagcag
catgggcagatccgtgggtaccaggttacgtacgtgaagctggaaaacaacgagccccga
gggcagccagtgatcaaggacgtcatgctgtcagaagcacagtggagagctgaggactcc
gtggaccatgagacggtgataggaggcctgctgccggaaaccacctactcggtcacggtc
gctgcctacaccaccaaaggagatggtgcccgcagcaagccaaaagtcatcaccaccaca
ggggcagtcccggggaagcccaccatgatgattagcacgacagccatgaacacagccctc
atccagtggcacccacccaaggagatggtaggggagctgctgggttaccggctgcagtac
agacgtcttgatgaggaaaagatgaacacgatagacttcgggaagagagaccatcactac
actgtgaccaacctgcacaagggggccacatacgtcttcaaattgtctgccaagaacaga
gctggcccgggagaggagtttgagaaggagatcactactgcagaagatgtgccaagtggc
ttcccacagaacctgcgtgtggtgggtctcaccacttccaccacagaagttgcatgggac
cccccggtcttggcagaaagaaacggcaagatcgtcaactacacagtggtatacagggac
ataaatagccagcaggacctggttaacatcaccaaggacacaagtatcactttgacgaat
ttgaagcccgatactacttacgacatcaaagtgagggcccgcaccaataaaggggttggg
ccgctcagccccagcatccagtcccggaccatgcctgttgagcaagtgtttgctaagaac
ttccgcgtcaatgccgtcatgaaaacgtctgtgctgctgagctgggaagtgcctgactcc
tataaatctgcagtgccttttaagattctgtacaatagccagagtgtggaggtggacggc
cactcgatgaagaaactcataagtgacctccagccagacacggactattcttttgtgcta
atgaatcgcgggagcagtgctggggggctccagcacctcgtctcaatccgaaccgctcct
gacgtcttgcagagcaaacccatcgccacaaacaagtacatacaggaaggaaaattcacg
ctcacccttcccaaagtccagaccactgtgccagttaggtggtactacatcgtggttgtg
ccagcggatcagagcaccagcagcccaactgctcggtggcggacacctgatgagatggag
ctggaccagctgctggaggccataagccaagggagtcagagcaggcgccagcgacgccag
gcagacagactcaagccctacattgctgctcaagtggatgtgctgcctgagaccttcact
ctgggggacgagaagaactacaaaggtttctacaacaagcccctgtctcaagacctgagc
tatcgctgcttcgtgctggcctcgctggaggatggagacacgaagagatatgcagcgagc
ccctactcggatgagatcgtgatggaagtggcttcagcaaagcagcaggatgaaccggag
atgctgtgggtgatgggacctgtcctggccgtgatattaatcatcatcattgtcattgct
atactcctcttcaaaaggaaaagggcgcactccccctcttccaaggatgagcactccatc
ggtctgaaggactcgctcttggcccactcctctgacccggttgagatgaggcggctcaac
taccagactccaggtgccagtgtccccagttgcccgaatatctcaagcatgcgtgaccac
ccccccatccccgtgacggacctcgccgataacatcgacaggctgaaagccaacgacggg
ctgaagttctcccaggagtacgagtccattgatccagggcagcagttcacctgggagaac
tccaacctggaagtgaataaaccaaaaaaccgctatgcaaatgtgatcgcctacgaccac
tcacgcgtcatcctgacctccatcgatggggtcccaggcagtgattacatcaatgccaat
tacattgatgggtatcggaagcagaatgcctacatcgccacgcagggacctctgccagaa
actctcagcgacttctggaggatggtgtgggaacagagaacagcaactatagtcatgatg
accaggctggaggagaagtccagggtaaaatgtgaccagtactggccaagccggggtaca
gaaacctatgggatgatccaggtgaccctgttggacacagtcgagctggcaacctacacc
gtccgcacctttgcactgtacaagaacggctccagtgagaagcgagagctacgacagttc
cagttcatggcctggcccgatcacggcgtgccagaataccccaccccgatcctcgctttc
ttgcgacgggtcaaggcctgtaacccaccggatgctgggcccatggttgtccattgcagt
gccggcgtgggacgaactggttgtttcattgtcattgatgccatgctggagcggatgaag
catgagaagacggtggacatctacggccacgtgacgtgcatgcgctctcagcgcaactac
atggtgcagacggaggaccagtacatcttcatccacgaggccttgctggaggcagccacg
tgtggcaataccgaggtgcctgcacgcaacctcttcgctcacatccagaagctgacccag
gtgccaccaggcgagagcgttactgcaatggagctggaattcaagctgctggccaactct
aaagcacatacctcacgtttcatcagtgccaacctcccgtgcaacaaattcaagaatcgc
ctcgtcaacatcatgccatatgagctgacaagagtctgtctgcagcccatccggggtgtc
gagggctccgattacatcaatgccagcttcatagatgggtacaggcagcagaaggcctac
atcgccacccagggaccgctggccgagaccacagaggatttctggcggatgctctgggag
cacaactccaccatcgtggtgatgttgacaaagctgcgcgagatgggccgggagaagtgc
catcagtactggcccgcagagcgctctgcccggtaccagtacttcgtggtggaccccatg
gcagagtacaacatgccgcagtacatcctccgggagttcaaggtgacagatgccagggac
ggccagtcacggaccatccgccagttccagttcacagactggcctgagcagggagtgcca
aagacaggagagggcttcatcgacttcattgggcaggtgcacaagaccaaggagcagttc
ggacaggatgggcccatcacggtgcactgcagtgctggggtcgggcgcacaggcgtgttt
atcacgctcagtatcgtgctggagaggatgcgctacgagggggtggtggacatgttccag
acggtgaagaccttgcggacgcagcgaccagccatggtgcagacagaggaccagtaccag
ctgtgctacagagcggcactggagtatctcggcagcttcgaccactatgcaacgtaa |