Chroicocephalus ridibundus (black-headed gull): 134520442
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Entry
134520442 CDS
T10910
Symbol
FBN1
Name
(RefSeq) fibrillin-1 isoform X1
KO
K06825
fibrillin 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04350
TGF-beta signaling pathway
crid04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134520442 (FBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134520442 (FBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
crid00536
]
134520442 (FBN1)
Glycosaminoglycan binding proteins [BR:
crid00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134520442 (FBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
134520442
NCBI-ProteinID:
XP_063201848
LinkDB
All DBs
Position
9:complement(38077931..38232445)
Genome browser
AA seq
2865 aa
AA seq
DB search
MWRGRLLGFALGVAVLWASQAGAAAAGHAEGASAKESRASRAKRRGQGGGGHDALKGPNV
CGSRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPNGQIAPSCGSKSIQH
CNIRCMNGGSCSDDHCLCQKGYTGTHCGQPVCENGCLNGGRCVAPNRCACTYGFTGPQCE
RDYRTGPCFTLITNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPN
IRTGACQDVDECQAIPGICQGGNCINTVGSFECKCPAGHKFNEVTQKCDDIDECSTIPGI
CDGGECSNTVSSYFCKCPPGFYTAPDGLKCIDVRPGYCFSSLTNGRCGGQLPQPLSKMQC
CCDSGRCWSSGAATAPEMCPIRSTDEYRKLCTVAALLPARPELPPSRPEVIPPPLLPGVY
PPQQPEIVYPSRAPPPHVILPVNFTDYCQLFRHLCLNGRCIPTPGSYRCECNKGFQLDVR
GECIDVDECEKNPCISGDCVNTQGSYICQCRIGYQSTATRTECRDIDECLQNGRICNNGR
CINTDGSFHCVCNAGFQVAADGKNCEDMDECSIRNMCLNGMCINEDGSFKCICKPGFQLA
SDGRYCRDIDECETAGICMNGRCVNTDGSFRCECFPGLAVGLDGRVCVDTHMRSTCYGGY
KRGQCVRPLTGAVTKSECCCASTDYAFGEPCQPCPAQNSAEYQALCSSGTGMTAGGNDIN
ECLLDTDLCPNGRCENLHGTYKCICDPGYEVDSTGKNCIDIDECALNMLLCDNGQCRNTP
GSFTCTCPKGFVYTPDLKTCEDIDECESNPCVNGVCKNTPGSFACECSPESTLDTTRTIC
IETVKGTCWQNIVDGRCEININGATLKSQCCSSLGAAWGSPCTPCERDPICQKGYSRIRG
TLCEDVNECEVFPGVCTNGQCVNTLGSFVCQCPNGMTLDASGRTCLDIRLESCYLQHEDE
QCTSQIPGRHRMDACCCSVGAAWGFECEECPLKGSPEFEALCPRGPGFSTKIEITGKPFS
KDINECKMVPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISPDLCGQGIC
VNTPGDFECECFEGYESGFMMMKNCMDIDECQRNPLLCRGGTCINTEGSFRCDCPPGHQI
SPNISACIDINECDLSTSLCRNGHCVNLIGKYQCACNPGYQSTPDKLYCVDIDECSIMNG
GCENFCTNSEGSYECSCKQGFALMPDHRTCTDIDECEDNPNICDGGQCTNIPGEYRCLCY
DGFMASEDMKTCIDVNECDLHPNICLSGTCENTKGSFICHCDMGYSGKKGTTGCTDINEC
EIGAHNCDRHAICTNTAGSFKCSCSPGWVGNGIKCTDLDECSNGTHMCSPHADCKNTMGS
YRCLCKEGYTGDGFTCTDLDECSENLNLCENGQCLNAPGGYRCECDMGFLPSPDGKACED
IDECSLPNICVYGTCHNLPGLFRCECEVGYELDRSGGNCTDVNECADPTTCISGTCVNTA
GSYTCECPPDFELNPTRVGCVDTRSGNCYLDIKTRGDNGGTFCSNEIGVGVSKASCCCSL
GKAWGVPCEHCPLVNTTEYKVLCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTF
GSFQCQCPSGYYLNEETRVCDDVNECDTPGICGPGTCYNTVGNYTCICPPDYMQVNGGNN
CMDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPIPSTDEFST
LCGSQRPGFFIDIYTGLPVDIDECREIPGVCENGICINMVGSFRCECPVGFFYNDKLLIC
EDIDECQNGPVCQQNAECVNTAGSYRCDCKPGYRFTSTGRCTDRNECQEIPNICSHGQCI
DTVGSFYCICHNGFKTNDDRTMCIDINECERDACGNGTCRNTIGSFNCRCNLGFILSHNN
DCIDVDECASGNGMLCRNGQCVNTIGSFQCLCNDGYEVALDGRTCVDVNECALEPGKCSP
GTCQNLDGSFRCICPPGYVLQNDKCEDIDECVEQPEICALGTCSNTPGSFKCLCPEGFVL
SSTGRRCQDLRVSYCFTKFEDGKCSVPKSRNHSKQECCCALKGQGWGDPCELCPEEADEA
FRQICPFGIGILVGPGDARLDVDECLDPDNCKFGQCINTDGSFRCECPYGYILQGAQCVD
TDECAVGNPCGNGTCRNVVGGFECTCVEGFEPGPMMTCEDVNECIQNPLLCAFRCVNTFG
SYECKCPAGYVLREDRRMCRDQNECEEGIHDCDSKQMECKNLIGTYMCICGPGYQRRPDG
EGCIDENECQTKPGLCENGRCVNTVGSYRCECNEGFTVSDTQNECLDNREGYCFTEVLQS
MCQIGSSNRNSVTKSECCCDGGRGWGQNCEVCPFPGTVAFKKLCPHGRGYMSNGADIDEC
KVIHDVCRNGECINERGSYRCHCNLGYTTDITGTLCIDLNECNESPKPCNFICKNTEGSF
QCSCPKGYILQEDGRSCKDLDECATKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDNN
ECATEINLCGAKGICQNTPGSFVCECQRGFSLDQTGLSCEDVDECDGNHRCQHGCQNIIG
GYRCSCPQGYLQHYQWNQCVDENECLSAHICGGASCHNTLGSYKCMCPTGFQYEQFSGGC
QDINECGSAQAPCSYGCSNTEGGYVCGCPPGYFRIGQGHCVSGVGLGKGQGQELSLSGEV
DDNSLSPEACYECKINGYPKRGRKRRSTNETANEAEDQQELEPPISLASWDIEKAAVFSI
NISDLSNKDRILELLPALTTLTNHNRYLIDSGNEDGFFRINKKDGISYLHFTKKKPVPGN
YSLQISSIPLYKKKELNQLEEKHDKDYLSGELGDNLKMKIQILLH
NT seq
8598 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgggggcggctgctggggttcgccctgggagttgccgtgctgtgggcgtcccag
gcgggcgccgccgccgccgggcacgccgagggggcgagcgccaaggagagccgggccagc
cgggccaagaggcgagggcagggcggcggcgggcacgacgcgctcaagggaccaaatgtg
tgtggatcacgttacaatgcttactgttgccctggatggaaaactttacctggtggaaac
caatgcatagtcccaatctgcagacattcctgtggggatggattttgctctagaccaaac
atgtgcacatgcccaaatggtcagatagccccctcctgtggttcaaaatcaatacaacac
tgtaacatccggtgcatgaacggaggtagctgcagtgatgaccattgcctgtgtcagaag
gggtatacaggaacacactgtggacagcccgtctgtgaaaatggatgtctaaatggaggg
agatgcgtggctccgaaccgatgtgcttgcacatatggctttactggaccccagtgtgaa
agagattacaggaccgggccttgcttcactttgataaccaaccagatgtgccagggacag
ctcagtggaatagtctgcacaaaaaccctttgctgtgcaaccgttgggagagcttggggc
cacccctgtgaaatgtgtcctgcccagccgcatccctgccgccgaggcttcatcccaaac
attcgaactggggcctgtcaagatgtggatgaatgccaagccatccctgggatctgtcaa
gggggaaattgcattaatactgttggatcttttgagtgcaaatgcccagctggacacaag
tttaatgaagtgacacaaaaatgtgacgatattgatgaatgcagcaccattcctggaatc
tgtgatggaggagagtgttcaaacacagttagcagttacttctgcaagtgtcctccaggg
ttttatacagctcccgatggcttaaagtgcatagatgtgcgtcctggatactgcttctct
tctctgaccaacgggcgctgcggcggtcagctcccccagcctttgtccaaaatgcagtgc
tgctgtgacagtggccgatgctggtcttctggtgcagccaccgctcctgaaatgtgcccg
atcagatccaccgatgagtatcgcaaattgtgcacagtagctgctctgctgccagcaaga
cctgagcttcctccgagtcgtcctgaggtcatccctccaccactccttcctggtgtttac
cctcctcaacagccagaaatcgtttatccatctcgggctccaccacctcatgtgatcttg
ccggtgaacttcactgactattgccaactgttccgacatctctgccttaatgggcgctgt
attcccactcctgggagctaccgctgcgagtgcaacaaaggattccaactggatgttaga
ggggaatgcattgatgttgatgaatgtgaaaagaatccatgcatcagtggagactgtgtg
aacacccagggatcctatatatgccagtgtcgtataggatatcagagcacagcaactaga
actgagtgccgagacattgacgaatgtttacagaatggccgtatctgtaataatggacga
tgcataaatacagatggcagttttcactgtgtgtgtaatgctggctttcaagtggcagct
gatgggaaaaactgtgaagatatggacgaatgcagcataaggaacatgtgcctcaatgga
atgtgcatcaacgaagatggcagttttaaatgcatttgtaaaccagggttccagttagca
tctgatggacgctattgcagagacatcgatgagtgtgagacagctggaatatgcatgaac
gggcgctgtgtgaacactgatggctctttcagatgtgaatgcttccctggccttgcagtg
ggactggacggacgcgtgtgtgtcgatacacatatgcgaagcacatgctatggcggctac
aagagaggacaatgtgtgagacccttaaccggtgcagttacaaaatcagagtgctgttgt
gccagcactgactacgcctttggggagccttgtcagccctgcccagcgcaaaattcagct
gaatatcaggctctgtgcagcagtggaactggcatgactgcaggaggaaatgatattaac
gagtgcttactggatactgatctctgtccaaatggaaggtgtgagaatctgcacggaaca
tacaaatgtatttgtgaccctggatatgaagtggattcaactgggaaaaactgcattgac
attgatgaatgtgcactgaacatgctgctttgtgacaatgggcaatgcagaaatacccct
ggaagtttcacctgcacctgtccaaaaggatttgtatacactcctgacctaaagacatgt
gaagatattgatgagtgcgagtctaacccctgcgtcaatggggtgtgcaaaaacacacca
ggctctttcgcttgtgaatgttctcctgaaagtactttggatacaaccagaaccatctgc
atagaaactgttaagggtacctgttggcagaacatagtggatggaagatgtgaaataaat
atcaatggagcaactctgaagtcccagtgctgttcctcactaggtgctgcttgggggagc
ccatgtacaccatgtgaacgagacccaatatgtcaaaagggatattcaagaataagagga
acattgtgtgaagatgtaaatgaatgtgaggtgtttcctggagtctgcacaaacgggcag
tgtgtcaataccttgggttcgtttgtttgccagtgccccaatggaatgactttagatgct
tctggccggacatgtcttgacattcgcttggagagttgctacctgcagcatgaagatgag
caatgcacctcacaaatcccaggccgacaccgaatggatgcttgctgctgttcagtgggg
gcagcatggggctttgagtgtgaggagtgtcctctgaaaggatcacctgaatttgaagct
ctttgtccaagaggacctgggttctctacaaaaatagaaataactgggaaacccttctct
aaagatatcaatgaatgtaaaatggtccccagtctttgtacccatggaaaatgcagaaat
accattggcagttttaagtgtagatgtgacagtggatttgcccttgattctgaagagagg
aattgcacagatattgatgaatgccgcatctctcctgatctttgtggccaaggcatctgt
gtcaatactcctggagactttgaatgtgaatgttttgaaggctatgaaagtggattcatg
atgatgaaaaactgcatggacatcgatgagtgtcagcgcaatccccttctctgccgaggt
ggcacctgcatcaacacagagggaagttttcggtgcgattgtcctccaggccatcagata
tcaccaaatatctctgcatgtatagacattaatgaatgtgacctaagcaccagcctgtgc
cgaaacggacactgtgtcaacctgattggaaagtatcagtgtgcttgtaatcctggatat
cagtccacacctgacaagctatactgtgttgatattgatgagtgcagtataatgaatggt
ggctgtgagaacttctgtacgaactcagagggcagctatgaatgtagctgtaaacaaggc
tttgcgctcatgccagaccacaggacatgcactgatattgatgagtgtgaagacaatcct
aacatctgtgatggaggccaatgtacaaacattccaggagaatacaggtgtctttgctat
gatggattcatggcatctgaagacatgaagacttgcatagatgttaatgagtgcgatctg
catccaaacatctgtctgagtggaacctgtgagaatacaaaaggctcatttatctgccat
tgtgatatgggatattcaggcaagaaaggcacaactggttgcacagatatcaatgaatgt
gaaattggagcccataactgcgatagacacgccatatgtacaaacacagcaggaagtttc
aaatgtagctgcagccctggctgggttggaaatggtatcaagtgcacagatctggatgag
tgctccaatggaacccacatgtgcagcccacatgctgactgcaagaatacaatgggctct
taccgctgcctgtgtaaagaaggttatactggggatggcttcacttgtacagacctcgat
gaatgctcagaaaacttgaatctctgtgaaaacgggcagtgcctcaatgcccctggagga
tatcgctgtgaatgtgatatgggatttttgccaagtccagatgggaaagcatgtgaagat
attgacgagtgctcacttcctaacatctgtgtctacggtacttgtcataacctccctgga
cttttccgatgcgagtgtgaagtgggctacgaattggacagaagtggtggtaactgcaca
gatgttaatgaatgtgcagatcccacaacctgcattagtggcacatgtgtcaatactgct
ggtagttacacctgtgagtgccctccggattttgagctgaatcccacccgagttggatgc
gttgatacacggtctggcaactgttacctggatattaaaactcgtggagataacggtggc
accttctgcagcaatgagatcggagtgggcgtttccaaggcctcctgttgctgctccctg
ggcaaagcatggggagttccctgtgaacattgcccacttgtgaacacaactgaatataaa
gttctttgccccggaggggaaggattccgaccaaaccccattacagttatattagaggat
attgatgaatgtcaagaactgcctggactttgccaaggaggaaaatgtattaatacattt
gggagcttccagtgtcagtgtccatcagggtactatttgaatgaagagactcgagtgtgc
gatgatgtgaatgagtgtgatacacctggcatttgcggacctggcacatgttacaatact
gttgggaactacacctgcatctgtcctcctgattacatgcaagtcaatggaggaaacaac
tgcatggatatgagaagaagtctgtgttatagaaattactatgctgacaatcaaacctgt
gatggtgagctgctctttaatatgaccaagaaaatgtgctgctgttcctacaacattgga
cgtgcatggaataagccttgtgaacagtgtcctatcccaagcactgatgaattctccaca
ctctgtggaagtcaaaggcctggcttcttcattgacatttatacaggattaccagttgat
attgacgaatgcagagagatacctggagtgtgtgaaaatgggatctgtataaatatggtt
ggcagcttccgatgcgagtgtcctgtgggtttcttctacaatgacaagctactgatctgt
gaagatattgatgaatgccaaaatggaccagtgtgtcagcaaaacgcagaatgtgtcaac
acagctggtagctaccgttgtgactgtaaacctggctacaggttcacatcaactggccga
tgcactgatcggaatgaatgtcaagaaattcccaatatttgcagccacgggcagtgtatt
gacactgttggaagtttctactgcatttgtcacaatggattcaagaccaatgatgacaga
acaatgtgtatagatattaatgagtgtgagagagacgcctgcggcaacggaacctgcaga
aacaccattggctctttcaactgccgctgcaatttggggttcatcctctcacacaacaat
gactgcatagatgtggatgagtgtgcaagtgggaatggaatgctctgcaggaacggtcag
tgtgtgaacacgatcgggtccttccagtgtctttgcaatgatggctatgaagtggctctg
gatggaaggacttgtgttgatgtcaatgagtgtgcactggagcctggaaaatgctcacca
ggcacatgtcagaacttggatgggtcattcagatgtatctgtcctcctggatatgtcctg
cagaatgacaaatgtgaagacattgatgagtgtgtggaacagccagaaatttgtgccctg
ggcacatgcagcaacaccccaggcagtttcaaatgtctgtgtccagaaggctttgtgttg
tcttccacaggaaggcgatgccaagatctgagagtaagttactgttttaccaaatttgaa
gatggaaaatgttctgtgccgaagtcccgaaaccactccaaacaagagtgttgctgtgcc
ttgaagggacagggatggggagatccctgtgagctctgcccagaggaagcagatgaggcg
ttcagacagatttgtccatttggaattggcatccttgttggacctggtgacgcaagattg
gatgtggatgagtgccttgatccagataactgtaaatttgggcagtgtatcaacacagat
gggtctttccgctgtgaatgtccatacggttacatcctacaaggagctcaatgtgtggat
actgatgaatgtgctgttggaaacccgtgtggaaacggaacttgcaggaatgtggtggga
ggttttgaatgcacctgcgttgagggatttgagcctggaccgatgatgacctgtgaagat
gtcaacgagtgcatacagaaccctctgctctgcgctttccgctgcgtgaacacttttgga
tcctatgaatgcaagtgccccgcggggtacgttctgcgagaggaccggagaatgtgcaga
gatcagaatgagtgtgaagaaggaattcacgattgcgactcaaaacagatggagtgcaaa
aacctaattggcacctatatgtgtatctgtggaccaggttatcagcgcagaccagatggg
gaaggctgtatagatgagaatgaatgtcagaccaaacctggactctgtgagaacggccgt
tgtgtaaacacagtgggaagttacagatgtgaatgcaacgaaggtttcactgtcagtgac
acccagaatgagtgccttgacaacagggagggctactgcttcactgaagtcttacaaagt
atgtgtcaaattggatcaagcaacaggaactctgtcaccaagtctgaatgctgctgcgat
ggtggccgaggctgggggcaaaactgcgaggtctgccccttcccaggcaccgtggccttc
aagaagctttgtcctcatggccgaggatacatgtctaatggagcagatattgatgagtgc
aaggttattcatgatgtctgccgtaatggggagtgcatcaatgagaggggatcttatcgt
tgtcattgcaaccttggctatactacagatataactggcactctttgcatagatctgaat
gaatgtaatgagtcccccaaaccttgcaatttcatctgcaaaaacacagaggggagcttc
cagtgttcatgtccgaaagggtacatcctgcaagaagatgggagaagctgcaaagatctt
gatgaatgtgcaacaaagcagcacaactgccagttcctttgcgtcaacactattgggggt
ttcacttgtaaatgtcctcctggattcactcagcaccatacagcctgcattgataataat
gagtgtgctactgaaatcaacttatgtggggcgaagggcatttgccagaatacaccagga
agttttgtttgtgagtgtcaacgtggcttctcactcgatcaaactggacttagctgtgaa
gatgttgatgaatgtgatggaaaccaccggtgtcagcatggctgccaaaatataattgga
ggatacaggtgtagctgcccacaaggatatctccagcattatcaatggaaccaatgtgtt
gatgaaaatgaatgtctcagtgcacacatttgtggaggagcatcttgccacaatactttg
ggaagctataaatgtatgtgccctaccggatttcagtatgaacagtttagtggaggttgc
caagatatcaatgaatgcggttctgcacaagccccatgcagttatggttgttcaaatact
gaaggtggctatgtctgtggatgtccacctggttacttcagaataggacaaggacactgt
gtttctggagtggggctaggcaaaggtcaaggacaagagctttcactcagtggagaagta
gacgacaactccctctctccagaagcttgttatgaatgtaaaatcaatggctatcccaag
agaggaagaaaacgcagaagcactaatgaaactgcaaacgaagcagaggatcagcaagag
ctggagccgccgatcagtctcgccagctgggatattgagaaagcagcagtcttctccatc
aacatctcggatctcagtaacaaagatcgcatcctggaactgcttcctgccctcacaaca
ctgacaaaccataaccgatatttaattgactccggaaacgaagacggtttctttagaatc
aataagaaagacgggataagttaccttcatttcacaaagaagaagccagtgcccggaaac
tattcattacaaatcagtagtattccactctataaaaagaaggaacttaaccagcttgaa
gagaaacatgacaaagactacctcagtggtgagctgggagataacctgaaaatgaaaatt
cagatattgcttcattaa
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integrated database retrieval system
