Chroicocephalus ridibundus (black-headed gull): 134524464
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Entry
134524464 CDS
T10910
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03440
Homologous recombination
crid03460
Fanconi anemia pathway
crid04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134524464 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
134524464 (BRCA1)
03460 Fanconi anemia pathway
134524464 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crid01009
]
134524464 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134524464 (BRCA1)
03036 Chromosome and associated proteins [BR:
crid03036
]
134524464 (BRCA1)
03400 DNA repair and recombination proteins [BR:
crid03400
]
134524464 (BRCA1)
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134524464 (BRCA1)
Protein phosphatases and associated proteins [BR:
crid01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134524464 (BRCA1)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134524464 (BRCA1)
Multi subunit type E3
BRCC complex
134524464 (BRCA1)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
134524464 (BRCA1)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
134524464 (BRCA1)
BRCA1-A complex
134524464 (BRCA1)
BRCA1-B complex
134524464 (BRCA1)
BRCA1-C complex
134524464 (BRCA1)
BRCA complex
134524464 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
134524464 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
BRCT_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_6
zf-Nse
zf-RING_5
BRCT_3
zf-RING_10
zf-MIZ
zf-ANAPC11
Zf_2nd_IFT121
zf-RING_4
UvrB
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
134524464
NCBI-ProteinID:
XP_063210595
LinkDB
All DBs
Position
17:complement(4219967..4244813)
Genome browser
AA seq
1866 aa
AA seq
DB search
MDFSVIAIGDVQNVLSAMQKNLECPICLDVVKEPVSTKCDHIFCRFCMFKLLSKKKKGVT
QCPLCKTEVTKRSLKENSRFKQLIEGLLETIHAFELDTGVKFSNSHHFPKTSTEATVAEF
LCKESSVIQSKGFRNRKKNAKENGQENCTLQEANVDTRLTDTRVKRCSLRNKTQKCASEK
GVYIEFGSDSSEELFKQASNIGLEDKEALQISSQEKLEELKSAEKGNDYSCNTQPDKLGA
EEVILPNVRGESDSSKEGLSKKSTRSITEYAKPGQVNMTEYWSSPLNVLAVDLLTEQCDR
IGNASPLSNGDTSFFKHAEEMAAEQTQCNTESKEFDLKDSSKSRLDKSKEIDTVVQSVEA
VEMHEPENDSAHEKEPPLEKLLQPETLHCATVNQVSRKRLKRSIQKVNEWFSKSNETLSS
SSSQDDSAGATDVSGEGDTCLSDKDSCISEKTDPMVDSMEIAVVEGNKRRSKQTADSIKD
KIFGKTYKRERRSNAPIILRDILPTTKKEEVTVDKKCLNNSSKGGLKRKRKTARVLQPED
FIQKKDTEEAGGCPQSVNRCLEDAEKKRCDESSAVSESHFSENGEDNAPAETEEGGGGSI
WKKATEKVTGKHCDRELELNSSDQKSTKKSSAAKKCRRSTRTMCALQLVVDRNSVSPDPG
EPQIDSYPSSEEPKKPDSEQRQVRRSRRLQLLSEEITKETGKGVVIKGAKKYDSDQEEFF
KVQRNVLVPTSECKDLCEPQGTLSYKPLTDLKGGDLEANEVQVSLKNSSDTAETGKSFFN
PTSSCQRSNYSSFAPDAGSQGDEILDSCSLLQPPSVTVVQTASHPTEEMPASGTTFPQDS
GHDKQNVPGEFRTEKLPMAKNVLELTKEAEDSELDTQYLRNIFRHSKRQSFSLYPTPTKV
CAVEDATSESLKIPCTDQVENKHDKYLKAENLQEKKTTAESLSRVCEKEELKTYESACVS
PVTCFVDSTECAHTGEHQEDVSQVANQGNLTPVRTVTARTENKSRSQKGEQGNEKTVSTD
AGIESELRENPIKSNRSRSDQSDTEEHIFKRTDLNTVDEMCFSSESYQAGKAKVVDSRGP
TPHFQPRSMICPAACQQKPAEFTCEVTGEKSSKRERKQVKGNEEQATQTASTGMPECSVM
EALEEPLQGNGDFTGLSETPDGLLCSDDGIEENSFSETDRRERSAVFVKRSDNALVKELH
DRNVNSKPSSQGIQRSRRRARKLQSSDEESSEDEDLPCFQTLIFGKSMSTPLQINKQGTF
VVASSVSPVTLPHSGSHDDNNMQKMPEAALSSGCVSPSQESECSVNLFSSQSNVSEESVD
GAQELKKPLIQGHTSKQVSNENESKETFQSCDGERKRSKTNFKDECQEDPNMGANLGEAS
GYDSETSNVEDSCGPFSQGEILTTQQKNAMQNNLKKLQQEMAMLEAVLKQHGSQDHEFLP
THRKLPHSSTEGTLGMEQMGQERGAESTSEGNSGNLNHRSSKGFSANDFHVMPSDCLNSK
IKELAKERSPELLLPSSKSRLLKRPDSEKGLQCDNVLKNKAPSGKTKPVQEAVPEYNQCQ
LEAENADEQESGTRLNSASVLSNLSGNVSRSPNKSSSSVRLLNPRTAEATSRSVVAQSAK
KSSAEECKSKRSVCFPVPVLQNAAGTDNATSLPVTNRKEMSIVASGLNKSEHLVVQKFAR
KTHSTLCNHITEETTHVIMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILD
EENFEVRGDVINGRNHQGPKRARQSLTEKIFKGFEICCYGPFTDMTTEHLEWMVELCGAS
VVKQLHLFTHTANSTAVVVVQPDAWMENTNYRAIQQENNVAMVTREWVLDSVACYECQEL
DAYLVS
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattgctattggagatgtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcttggatgtggtaaaagagcctgtttcgacaaaatgtgat
cacatattctgcaggttctgcatgttcaaactcctcagcaaaaagaaaaaaggtgtgaca
cagtgtcctctgtgtaagactgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaactatccatgcatttgagcttgacactggagta
aaattttcaaacagtcatcactttcctaaaacatccacagaagccactgtcgctgagttc
ctctgtaaagaaagttcagtcatccaaagcaagggtttcagaaacaggaaaaaaaatgct
aaagaaaatggacaagaaaactgcaccttgcaggaagctaatgtggatacacggcttaca
gataccagggtcaaaaggtgttccctgagaaacaaaacccagaaatgtgcctctgaaaaa
ggggtttatatagagtttggttctgattcatctgaagagctttttaaacaggcaagcaat
attgggttagaagacaaagaagcacttcagatttcatctcaagaaaagctagaagaactt
aagagtgctgagaaggggaatgactattcctgcaatacacagcctgacaagctgggtgct
gaagaagtaattctaccaaatgtcagaggtgaaagtgattcctcaaaggaaggcttgagc
aagaaaagcactcggagcatcactgaatatgccaaacctggccaagtgaatatgactgaa
tactggagttctcctttaaatgttcttgctgtagacctactcacagagcagtgtgacaga
ataggtaatgccagtcccttaagcaacggggacacatctttctttaagcacgcagaagaa
atggctgcagagcaaactcagtgcaatactgaaagcaaagagtttgacttaaaagatagc
tcaaagagcaggttggataaaagcaaggaaatagatactgttgtacaaagtgtggaagct
gtggaaatgcacgaacctgagaatgattctgcccatgaaaaagaacctcctctggagaaa
ctacttcagccggagacacttcactgtgctaccgtgaatcaagtctctaggaagagactg
aagcgaagcattcagaaagtcaatgaatggttttcaaaaagcaacgaaactctgtcttcc
agttcttcccaggatgattctgctggagcaactgatgtttcaggtgaaggagatacatgt
ttatcagataaagattcctgtatttcagaaaagacggaccctatggtagactctatggaa
attgcagtggttgaaggaaacaagagaaggtcaaaacaaacagcagatagcatcaaagac
aaaatatttgggaaaacatacaagagagagaggaggtcaaatgcccctattatcttgaga
gacattttacctactacaaaaaaggaagaagtgacggttgataagaaatgcttgaataat
tccagtaaaggtggactaaaacgaaaaaggaagactgcccgtgtcctgcaacctgaagat
ttcattcagaaaaaagatacagaagaggcaggtgggtgccctcaaagtgttaaccggtgc
cttgaagatgctgaaaagaaaagatgtgatgaaagttctgctgttagtgagagtcacttc
tctgagaatggagaggataatgcaccagcagaaacggaggaaggaggaggaggatccata
tggaaaaaagctactgaaaaggtgactggcaagcactgtgacagggaactagaactgaat
agctctgatcagaaaagcactaaaaaaagttctgcagcaaaaaaatgcaggcgttctact
agaaccatgtgtgctctgcagttagtagtggatagaaattctgtttcccctgatccaggt
gagccacagattgatagctatccaagcagcgaagaaccaaagaaacctgattctgagcaa
agacaagtcaggcgcagcaggaggcttcagttactttctgaagaaattacaaaagaaaca
ggaaaaggagtagtaattaaaggagcaaaaaagtatgacagtgatcaggaagagttcttt
aaagtccaaagaaatgtgttagttcccacttctgagtgcaaagacctgtgtgagccccag
ggtacgttaagttacaagccactcactgatctgaagggtggtgatctggaagcaaatgaa
gtacaggttagtctaaagaattcatctgacaccgcagaaactggaaaaagtttcttcaat
cctacatcttcatgtcagcgttcaaactatagttcctttgcacctgatgcaggttctcaa
ggagacgaaatacttgatagctgttccctcctacagcctccttcagtgactgtcgtgcaa
actgcttcccacccgactgaagagatgcctgcatcaggtactaccttcccccaggatagc
ggacatgataaacaaaatgttccaggggaattcagaactgaaaagttgccaatggctaaa
aatgttttggaattgacgaaggaagctgaagatagtgagttagacacacagtatctgcga
aatatatttaggcattcaaaacgccaatcatttagcctttatcctacacccacaaaagtg
tgtgcagtagaagatgccacttctgaatctctaaagataccatgtactgatcaggtagaa
aataagcacgacaaatatttaaaagcagaaaacttgcaagaaaagaaaacaactgctgaa
agcttgagtagggtttgtgagaaagaggagcttaagacctatgaatctgcttgtgttagt
cctgtgacttgctttgtcgacagtactgaatgtgcgcacacaggggaacatcaagaagat
gtttcacaggttgcgaatcaagggaatctgacgccagtaagaactgttactgctaggact
gaaaacaaaagcagatcacaaaaaggagaacagggaaatgaaaagacagtgtcaactgac
gcaggaatagaaagcgagctgagagagaatccaatcaaaagtaacagaagccgaagtgat
cagagtgatacagaagagcacattttcaaaagaactgatttaaacacagtcgatgaaatg
tgcttcagttcagaaagctatcaagcaggaaaagccaaagttgttgacagcagaggacca
acaccacattttcagcccagatcaatgatttgtcctgcagcttgtcagcaaaagcctgct
gagttcacctgtgaagtcactggggaaaaaagcagcaaaagagaaagaaaacaagtaaag
gggaatgaggaacaagcaacccaaactgctagcacagggatgcctgagtgttcagtcatg
gaggctctagaggagccccttcaagggaacggtgattttacaggtttgtctgaaaccccc
gatggcttactgtgctctgatgacggtattgaagagaacagcttttctgaaaccgatagg
agagagagatctgctgtgtttgtaaaaagaagtgacaatgccctggtaaaagaactgcac
gatagaaatgttaattctaagccaagttctcaaggtattcaaagatctcgaagaagagcg
cgaaaattgcaatcttcagatgaagaatctagtgaggatgaagatttaccgtgttttcaa
actttaatatttggcaaatcgatgagcacacctttgcagatcaataaacaagggacattt
gtggtagcgtcctcagtaagtcctgtcacattgcctcacagtggaagccatgatgacaat
aatatgcagaaaatgcctgaagctgccctaagtagtgggtgtgtttcaccaagccaggag
tcagaatgctctgtcaacttgttttcttcccagtccaatgtttctgaagaatcagttgat
ggagcacaagaactcaagaaacctttaatacaaggtcatacatccaaacaagtgagcaat
gagaatgagagtaaagaaacttttcaaagttgtgatggagagcggaagagaagcaaaact
aacttcaaagatgaatgccaggaagacccaaacatgggagccaacctaggtgaagcatct
ggatatgacagtgaaacaagtaatgtagaagattcatgtggaccgttctctcagggtgaa
atccttactactcagcagaagaatgctatgcaaaataatctaaaaaaacttcagcaagaa
atggctatgcttgaagcagtgctgaagcagcatggaagtcaggaccatgaatttctacct
acgcataggaaactgccacattccagtactgaaggaacacttggaatggaacaaatggga
caagaaagaggggcagaatcaacctcagaaggaaattctggaaatcttaatcacagaagt
tcaaagggattttcagccaatgatttccatgttatgccaagtgattgtctcaacagtaaa
atcaaagagttagcaaaagaaaggtctccagaattgttgcttccatcttctaaatcccgt
ttgttaaagagaccagattcggagaaaggccttcagtgtgacaatgttctgaagaacaaa
gctccttctggaaagacaaaacctgtgcaggaagcagtgccagaatataatcagtgtcag
cttgaagcagaaaatgcagatgagcaagaatctgggaccaggctaaacagtgcatctgtc
ttatcaaatctctctggaaatgtgtccaggagtccaaataagtcttcctcttctgtaagg
cttcttaatcctcggactgcagaagcaacgagtcgttctgttgtagctcagagtgctaag
aaaagctctgctgaggaatgtaaatcaaagagaagcgtgtgttttcctgtacctgttctg
caaaatgcagctgggacagacaatgctacaagtctacctgtgactaacaggaaagaaatg
tcaattgtggcatcaggtctgaataaaagtgaacatttggtggtccagaagtttgccaga
aaaactcacagcactttatgtaaccacattactgaagaaacaacccatgtcataatgaaa
acagataaggagctcgtgtgtgaacggacactgaagtactttctgggtattgcaggaaga
aaatgggtagttagttatcagtgggtaattcagtcttttaaagaaggaaggatactggat
gaggagaactttgaagttagaggagacgtaatcaatgggagaaaccaccaaggtcccaag
agggctagacagtctctaactgaaaagatctttaaaggctttgagatctgctgctatgga
cctttcactgatatgactacagaacatctagaatggatggtggagctttgtggtgcctct
gtagtgaagcagcttcatctgttcacgcacacagcaaattctactgctgtcgtggttgtg
cagccagatgcttggatggaaaacacgaattacagagcaatccagcaagagaacaatgtt
gccatggtgactcgggagtgggtgttagacagcgttgcctgctatgagtgccaggagttg
gatgcttaccttgtgtcctaa
DBGET
integrated database retrieval system
