Chroicocephalus ridibundus (black-headed gull): 134525746
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Entry
134525746 CDS
T10910
Name
(RefSeq) lactosylceramide 4-alpha-galactosyltransferase-like isoform X1
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid00601
Glycosphingolipid biosynthesis - lacto and neolacto series
crid00603
Glycosphingolipid biosynthesis - globo and isoglobo series
crid01100
Metabolic pathways
Module
crid_M00068
Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
134525746
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
134525746
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crid01003
]
134525746
Enzymes [BR:
crid01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
134525746
Glycosyltransferases [BR:
crid01003
]
Glycan extension
P blood group
134525746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
134525746
NCBI-ProteinID:
XP_063212978
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Position
1:145329432..145342769
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AA seq
384 aa
AA seq
DB search
MLVWPHITTVVLREQALTGARLPRMSSCLPKLTTAVLSHRLRALFILTISFVFFASVMFH
WRTGEDAEGQLYSLPTQSRCEQFLPCLPNPTDGGPPHSSGDVFFVETSEQINPSYLFTCS
VESAARTHPGTRVMVLMKGLANGNASLPNHWAFSLLRCFPNVEIRPLDLPELFSGTPLAK
WYLQSEHQKEPYFLPVLSDACRITIMWKFGGIYLDTDFIVLKNLKNLTNALGLQSQDVLN
GAFLSFTPKHEFMELCMQDFVDNYNGWIWAHQGPELLTRVFKKWCSIKNIQNNMSCKGVR
ALSPEAVYPIRWEDWKKLFETISSSELHKLLKNTYAVHVWNKLSHGTRLEITSQALLAQL
YSQFCPATYAKMKEDSEEQSRPAM
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtttggcctcatatcacaacagttgtcttgagagagcaggctctgacgggagcg
agactgcccaggatgtccagctgcctgccaaaactgaccacggcggtgctgagccacagg
ctcagggctctgtttatcctcaccatttcttttgtgttctttgcctctgtcatgttccac
tggagaactggggaggacgctgagggccagctctacagcttgcctacacaaagcaggtgt
gaacagtttttgccttgccttcccaatcctactgatggtgggccccctcattcctcaggg
gatgtgttttttgtggagacctctgagcaaattaacccaagttacctgttcacatgctct
gtggagtcagcggccaggacgcaccctgggacaagggtcatggtgctcatgaaaggtttg
gcaaatgggaatgcctccttacccaaccactgggcattctcattgctgagatgcttcccc
aatgtggaaatccggcccctagacttaccagagcttttctcagggacgcctctggcaaag
tggtacctgcagtctgagcaccagaaggaaccgtatttcttacctgtcctgtctgatgcc
tgcagaattaccatcatgtggaaatttggtggcatctacctggacacagacttcattgtg
cttaagaacttaaagaacctcaccaatgcccttggtctccagtctcaggatgtactgaac
ggggcctttctgtcctttacacccaagcatgagttcatggagctttgcatgcaggacttt
gtggataactacaatggctggatctgggcgcaccagggcccagaactcttaacgcgtgtc
ttcaagaagtggtgctccatcaagaatatccagaacaacatgagctgcaaaggggtgcgt
gctctttccccagaagccgtttatcctattcgctgggaggactggaagaagttatttgaa
acaatcagctcctcagagcttcacaagctccttaagaacacctacgcggtgcacgtgtgg
aacaaactgagccacgggacaaggctagagatcacatcccaggctttgctggctcagctg
tattctcagttctgccctgccacatatgcgaagatgaaggaggactctgaagagcagtca
aggcctgcaatgtga
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