Chroicocephalus ridibundus (black-headed gull): 134525973
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Entry
134525973 CDS
T10910
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid00310
Lysine degradation
crid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
134525973 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crid03036
]
134525973 (SETDB1)
Enzymes [BR:
crid01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
134525973 (SETDB1)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
134525973 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
134525973 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
WH_PARP12
Motif
Other DBs
NCBI-GeneID:
134525973
NCBI-ProteinID:
XP_063213392
LinkDB
All DBs
Position
21:2329664..2349254
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AA seq
1279 aa
AA seq
DB search
MDSQEIKELQQEVMEELGISMEELQDIIDKELEKFECVKQRKQQLEELEKCVKQKEEEVA
RVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDSAAKPMEVIEIPDEDDDDVM
SIDSGWKHSDSSSRIAKDQTLLREAMAAMRKSAQDVQRFMDAVNKKTNAQDAQKDAQTPQ
ETPGSAQPVGPAVAGSDLSNDGDLNVGMRILGKKRTKTWHKGTLIAIQTVAAGKKYKVKF
DNKGKSLLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKDRFL
IFFDDGYASYVKEWELYPICRPLKKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLI
KTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQS
GQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSVSPQPAEMECSDS
QLAQSRKQVAKKSTSFRPGSVGSGQSSPSSPVLSDTPPAGRTGAAPQHRLSSSQAGGGTA
QAFHGMMDRVPNEPPYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDF
RRMTARRRVNRKMGFHVLYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVDR
KFQPYKPYYYIADITKGREDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLVG
CDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCN
INMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLE
MGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKDEEEENTGTEEQEESNEDSSDD
NFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDETAVAASCKLPV
SEETSKNKVASWLSSNSMSDGFQDNDSASSFKMSEGSEAKASKMDLPGEREKPSASALDN
VDGESKAVKKDEPEDPTKIPGLSDVGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSLAP
QPTTDDVLTLSSSTDSEGENGQAAAGQAQGTANDSDDIQTISSGSEEEEGDDKKNPSSGS
GPVKRQVAVKSTRGFALKSTHGIAIKSTNMAAAEKGESVPVRRTTRQFYDGEESCYIIDA
KLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSV
EGKELLCCCGAIECRGRLL
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaggagatcaaagagctgcagcaagaagtgatggaggagctgggaatctcc
atggaggagctccaggatatcatcgacaaagagctggagaagtttgagtgtgtgaagcag
aggaagcagcagctggaggagctggagaagtgcgtgaaacagaaggaagaagaggtggct
cgcgttgaccggctctttgatgatgcttcgagagccattgataaatgtgagatactggtg
aaggatctgtactccaagctgggactccagtaccgtgagagcagttctgaggatgaggat
tcggctgccaagcccatggaagtgattgagatcccagatgaagacgacgatgatgtcatg
agtatcgattcgggctggaagcacagtgacagcagttccagaattgcaaaggatcagact
ctgctgcgggaagccatggctgcaatgagaaagtctgcccaggatgttcagagatttatg
gatgccgtgaacaagaaaacaaatgcccaggatgcacaaaaagatgcacagacccctcag
gaaactcctggctctgcccagcctgttggtcctgcagtggccgggagcgatctcagcaat
gacggtgatctgaacgttggcatgaggatcctgggcaagaagagaaccaaaacgtggcac
aaaggaactctgattgcaatccagacagtcgctgctggtaagaagtacaaagtgaaattt
gataataaagggaagagtttgctttctggcaatcacatcgcttacgactatcacccctcg
cctgagaaacactacgttggcagcagggttgtggcaaaatacaaggacgggaatcaggtt
tggctgtacgctggcattgtggctgaaaccccaaacgtaaagaataaagacaggttcctg
atcttctttgatgatggctacgcttcatatgtcaaggagtgggagctgtacccgatctgc
aggccactgaaaaagacctgggaagacatagaggatgtttcctgtcgcgatttcatcgag
gagtacatcacagcgtaccccaaccgccccatggtgctgctgaagaacggccagctcatc
aaaacggagtgggaagggacttggtggaaatccagagtggaagaagtggatggcagtctg
gtcaaaatcctgttcctggatgacaaacgctgtgagtggatttaccggggttccacgcgc
ctcgagcccatgttcagcatgaaaacttccacagcctccacccaagaaaagaagcaaagt
ggacaagcaaggacacgtcccaacgtcggtgctgtcaggagcaaagggcctgtagtacaa
tatacgcaagatttaacgggagctggtacccagtacaaacctttagagcaaatgcaggca
gcctcgctggctgcacggtccgtttctccgcagcctgctgagatggaatgctccgacagt
cagctggcccagtcgagaaagcaagtggccaagaaaagcacttccttccgtcctggctcc
gtgggctccgggcagtcgtcgccttcttcgcctgtcctcagtgatacacctccagcggga
aggaccggtgcagctccgcagcatcggctctccagcagccaggcgggcggtggcacggca
caggccttccacggcatgatggaccgcgtgcccaacgagcccccgtaccgagccccgctg
gagaaactcttctacctgccgcacgtctgcagctacacctgcctgtcccgcgtccgtccc
atccgcagcgatcagtaccgcagcaagaaccccctgctcatcccgctgctctacgacttc
cgacggatgacagcccgccgacgggtcaaccgcaagatgggcttccatgtcctctacaag
acgccgtgcgggctctgcctgcgaaccatgcaggagatcgagcgctacctttttgagaca
gactgcgacttccttttcctggagatgttctgcctggacccctatgtgctggtggatcgc
aagttccagccctacaaaccctactactacatcgcagacattaccaaaggcagggaggac
gtgccgctgtcctgtgtcaacgagatcgataacaccccgcctccgcaggtggcctacagc
aaagaacgcatccccggcaaaggggtttacatcaacaccagctgggagttcctcgtgggc
tgcgactgcaaagacggctgcagagacaaatcgaaatgtgcctgtcaccagctgacagtc
caagcgactggctgcaccccaggtggacagatcaaccccaattcgggataccagcacaaa
aggctggaagaatgcctcccgacaggagtttacgagtgcaacaagaggtgcaagtgcaac
attaacatgtgcaccaatcgcttggtccaacacgggctccaagtccgactgcagttattc
aagacgcagaacaagggctggggcattcgctgccttgatgatattgctaaaggctctttc
gtctgcatctacgcagggaaaatcctcacagatgacttcgccgacaaagaggggttagag
atgggtgatgaatattttgcgaacctggatcacatcgagagcgtggagaacttcaaggag
ggctacgagagcgacgcaaaatgctcttcggacagcagcggggtggacctcaaggacgaa
gaggaggagaacacaggcactgaggagcaggaggagtccaacgaggacagctctgacgac
aacttctgcaaggacgaggacttcagcaccagctcggtatggcgcagctatgccacacga
cggcagacccggggccagaaggagaacgggctgtcggagacagcctccaaggactcgggg
ctcacccggcaaatcagccacgacgagacggcggtggctgcctcctgtaagctgccggtg
tcggaagagacctccaagaacaaagtggcctcgtggctgagctccaacagcatgtctgac
ggcttccaggacaatgacagcgcctcctctttcaagatgagcgaaggcagcgaagccaag
gccagcaaaatggacctccctggtgagagagagaaaccctccgcttcggccctggacaac
gtggacggagagtcaaaggcagtgaagaaagatgaacctgaagatccaaccaaaattccc
gggctgagcgacgtgggaaggatgtacggctacaaccccagccctcccaagctggaaggg
atccgcaggccgacgagcaagacggccctgctccagagcagacggcattctctcgccccg
cagcccaccacggacgacgtgctgaccctctccagcagcacggacagcgagggggagaac
gggcaggcggcggcggggcaggcccagggcaccgccaacgacagcgacgacatccagacc
atttcctcgggctccgaggaggaggaaggggacgacaagaaaaacccctcgtctgggtca
ggtcctgtgaagaggcaggtggcggtgaaatccacccgcggcttcgccctcaaatcgact
cacgggatcgccatcaagtcaaccaacatggcagcggccgagaaaggcgagagcgtgccc
gtccgcagaaccacccgccagttctacgacggggaggagtcctgttatatcatcgatgcc
aagctggaagggaacctgggccggtacctcaaccatagctgcagccctaacctcttcgtg
cagaatgtttttgtggacacgcacgacctccgcttcccctgggtcgccttcttcgccagc
aagaggatacgagccggcacagagctgacctgggattacaactacgaagtgggcagcgtg
gaaggcaaagagctgctgtgctgctgcggggccatcgagtgccgggggcggctgctctga
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integrated database retrieval system
