Cylindrospermopsis raciborskii: L3I90_02765
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Entry
L3I90_02765 CDS
T08337
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L3I90_02765 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crk03400
]
L3I90_02765 (nth)
Enzymes [BR:
crk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
L3I90_02765 (nth)
DNA repair and recombination proteins [BR:
crk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L3I90_02765 (nth)
Prokaryotic type
L3I90_02765 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UJS05190
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All DBs
Position
626848..627531
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AA seq
227 aa
AA seq
DB search
MLKSSESCVSMGNKKISKLSKRGLALEILSRLYRLYPDATCSLNYQTPVQLLVATILSAQ
CTDERVNKVTPDLFGRFPDVQSLAEADVLELEKLVHSTGFYRNKAKNIKSACMMIVSDFN
SIVPNKMEELLKLPGVARKTANVVLAHAYGINAGVTVDTHVKRLTQRLGLTASTEPISIE
KDLMELLPQPEWENWSIRLIYHGRAVCKARSPSCENCDLVDVCAKKL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaatcatcagaatcctgcgtctccatgggtaataaaaaaatctccaaactatct
aaaaggggactagctttagaaattctctctcgtctttatcgtctttatcctgatgcaacc
tgttctctaaactatcaaaccccagtccaacttttggtggccactattctttccgcacaa
tgcacggatgaaagagttaataaggtaaccccagatttatttggtcgctttcccgatgtc
caaagtttagcagaagcagatgtattagaattagagaaattagttcattctactggtttc
tatcgcaacaaagccaaaaacattaaatccgcgtgtatgatgatagtgagtgattttaac
tcaattgttccaaataagatggaggaactattaaaactacccggggtagcaagaaaaacg
gcaaatgtggtcttagctcatgcttatggtattaatgcgggggtgacggtggatacccac
gttaaaagattaactcaacggttaggtctaacagcaagtaccgaaccaattagcatagag
aaagatttaatggaactactaccccaaccggaatgggaaaactggtcaataagattaata
tatcatggtcgtgcagtttgtaaagctagatctcccagttgtgaaaattgcgatttagtt
gatgtatgtgctaaaaaactttaa
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