Cylindrospermopsis raciborskii: L3I90_13180
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Entry
L3I90_13180 CDS
T08337
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk00270
Cysteine and methionine metabolism
crk00450
Selenocompound metabolism
crk00670
One carbon pool by folate
crk01100
Metabolic pathways
crk01110
Biosynthesis of secondary metabolites
crk01230
Biosynthesis of amino acids
crk04980
Cobalamin transport and metabolism
crk04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
L3I90_13180 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
L3I90_13180 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
L3I90_13180 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
L3I90_13180 (metH)
04980 Cobalamin transport and metabolism
L3I90_13180 (metH)
Enzymes [BR:
crk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
L3I90_13180 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Pterin_bind
Met_synt_B12
B12-binding_2
B12-binding
CdhD
Motif
Other DBs
NCBI-ProteinID:
UJS04048
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Position
complement(2988505..2992038)
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AA seq
1177 aa
AA seq
DB search
MTHSFLERLHSPEHPVIVFDGAMGTNLQIQNLTAEDFGGPEYEGCNEYLIHTKPEAVAKV
HRDFLLAGADVIETDTFGGTSIVLAEYDLADQAYYLSKTAAELAKRVAAEFSTPEKPRFV
AGSIGPTTKLPTLGHIDFDTMKSAFAEQVTALFDGGVDLFIVETCQDVLQIKAALNGIEE
VFSQKGERRPVMVSVTMESMGTMLVGTEIAAVLTILAPYSIDILGLNCATGPDLMKPHIK
YLSEHSPFVVSCIPNAGLPENIGGQAHYKLTPLELRMALMHFVEDLGVQVIGGCCGTRPD
HIQQLAEIAKDLKPKVRQPSLEPAAASIYSTQNYTQDNSFLIVGERLNASGSKKCRDLLN
AEDWDGLVSIARSQVKEGAHILDVNVDYVGRDGVHDMHELVSRVVNNVTLPLMLDSTEWE
KMEAGLKVAGGKCLLNSTNYEDGEPRFLKVLELGKKYGAGVVIGTIDEEGMARTAQKKFE
IAQRAYRQAVEYGIPASEIFFDTLALPISTGIEEDRKNGSATIESIRRIREELPECHVIL
GVSNISFGLNPAARIVLNSMFLHEAMEAGMDAAIVSASKILPLAKIDPQHQEVCKQLIYD
QRRFNGDVCVYDPLAELTRLFAGVKAKQNRGIDESLPIEERLKLHIIDGERIGLEAQLAK
ALEQYPPLDIINTFLLDGMKVVGELFGAGQMQLPFVLQSAETMKAAVAYLEPYMEKSGAG
SNGKGIFVIATVKGDVHDIGKNLVDIILSNNGYKVINLGIKQPVENIIQAYEKHQPDCIA
MSGLLVKSTAFMKENLEVFNEKGITVPVILGGAALTPKFVNQDCQNTYHGKVIYGKDAFD
DLNFMDKLMPAKAAGKWDDLQGFLDEVKGDLPEINPQIKERIKEEVKQQPTEVDTRRSEA
VNANIERPQPPFWGSRFLQPQDIPLEEVLYYLDLQALIVGQWQFRKPKEKSQAEHQEFLI
DTVYPLLENWKQRVIQEKLLHPQVIYGYFPCQAVGNSLLIYETTHINSKNPVITTTFEFP
RQRSGRRYCIADFFAPKESGLIDVFPMQAVTVGEVATKFAQNLFAENKYTDYLYFHGIAV
QVAEALAEWIHAKIRQELGFGDVEPDNIRDILAQRYQGSRYSFGYPACPNISDQHKQLQL
LDANRMGMYMDESEQLYPEQSTTAIIAYHPTAKYFTA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgacccattcctttcttgaacgtttacatagtcctgaacatccagttatagtgtttgat
ggtgcaatggggacaaacctacaaattcagaacctaaccgctgaggattttggaggtccc
gaatacgaggggtgtaatgaatacctaatacacaccaaaccagaggcggtggccaaagtt
caccgggactttttactagctggcgcagatgtaattgaaactgatacctttggtggcacc
tccatagttttagcagagtatgacttagcggatcaagcttattatctaagtaagaccgcc
gccgagctggctaaacgtgtagctgcggagttttccactccagaaaaacccagatttgtt
gctggttccataggtccaaccaccaagctgccaactttaggacacatagactttgacacc
atgaaatcagcttttgctgaacaggtaacagctctatttgatggtggggtagacctattt
attgtagaaacttgccaagatgtattacagattaaagctgcattaaatggcatagaggaa
gttttcagccaaaaaggtgaaagaagaccggttatggtttccgtcaccatggaaagtatg
ggcaccatgctggttggcacagaaattgccgccgttttaaccattttagcaccatattcc
attgatattctaggtttaaactgtgccactggtccggacttaatgaaaccacacattaag
tatttatcagaacattcaccttttgttgtatcttgcattcccaatgcggggttaccggaa
aatataggtggtcaagctcactataaactgactcccttagaactgcgcatggcgttgatg
cattttgttgaagatcttggtgtccaagtgattgggggttgctgtgggacacgaccagat
cacattcaacaattggcggaaattgctaaggatttaaaaccaaaggtgagacagccaagt
ttggaacctgctgctgcatcaatttattccacacaaaattacacacaggataattcgttt
ttaatagttggtgagcgtctcaatgctagtggttccaaaaaatgccgcgatttgctcaat
gctgaggactgggatggtttagtttccatagctcgcagtcaagttaaggagggggctcac
attttagatgtgaatgttgattatgtggggagagacggggtgcatgatatgcacgagtta
gtttcccgggttgtgaataatgtaactctccccctaatgctggattccaccgaatgggaa
aaaatggaagcgggtttaaaagtggctgggggtaagtgtttactcaactccactaactat
gaagatggagaaccacgttttttaaaggtgttggaattagggaaaaagtatggtgctggt
gtggtgattggtactattgatgaggagggaatggccagaacagcacagaagaagtttgaa
attgcccagcgcgcttatcgtcaagcggttgagtatggcatacctgcatcagaaatattt
tttgacactttagctttaccgatttctactggcatagaagaggatcggaaaaatggcagt
gcgaccatagagtctattcgccggatcagggaagaattgcccgagtgtcatgtaattttg
ggtgtgtctaatatatcctttggtttaaatccagcagcgcggattgtattaaactctatg
tttttacatgaggcaatggaagctgggatggatgcagctattgttagtgcaagcaaaatt
ttgcccttggcgaaaattgacccacaacatcaggaagtgtgtaaacaactaatatatgat
cagcgcaggtttaatggggatgtatgtgtatatgatcccttagctgagttaacgagatta
tttgcgggagttaaggctaaacagaatcggggaattgatgaaagtttgcccattgaagag
cggttgaaactacatattattgatggtgagagaataggtttggaggcgcaattagccaag
gccttggagcagtatccccccttagatattatcaacactttcttgttggatgggatgaag
gttgtaggtgaattatttggtgctggccaaatgcagctaccctttgttttgcaatcagca
gaaaccatgaaagcagcggtggcctatttggaaccatatatggaaaagtcgggagctggt
agtaatgggaaagggatttttgtgattgccacggttaagggcgatgttcatgatattggt
aaaaatctggtagatatcatcttatccaataatggttataaggtgattaatttggggatt
aagcaaccggtggaaaatatcattcaggcttatgaaaagcaccaacctgattgtattgcc
atgagtggtttattagttaaatccaccgcatttatgaaggagaatttagaggtttttaat
gaaaaaggcattacggttcctgtaattttgggaggtgcagcattaactcctaagtttgtc
aaccaggattgtcaaaacacttatcacggcaaggtgatctatggtaaagatgcttttgat
gacttgaattttatggataaattaatgccagcaaaagcagcgggtaaatgggatgattta
caagggtttttggatgaggttaagggagatcttccagagattaatccccaaattaaagag
cggattaaggaggaagtaaaacagcaacccacggaagtagatacccgacgttctgaagcc
gtgaatgccaatattgaacgtcctcaaccacctttttggggaagtagatttttacaaccc
caggatattcctctagaggaagtattgtactatttagatttacaggctttgatagtggga
caatggcaatttcgcaaacccaaagaaaagtctcaagcggaacaccaggagtttttaatt
gatacggtctacccccttttagaaaactggaagcaacgtgtaatccaggagaaattattg
catccccaggtgatttatggatatttcccctgtcaagcagtaggtaatagtttattgatt
tacgaaactacccacattaatagtaaaaatcctgtaattaccacaacttttgaatttcct
cgccaacgctccgggagaagatattgtattgctgatttctttgctcccaaagagtcagga
ttgattgatgtattccccatgcaagcggtaactgtgggagaggtagcaacaaagtttgcc
caaaatttatttgctgagaataaatacactgactatctctactttcacgggatagcagta
caggttgctgaggcattagcggaatggattcacgctaaaatacgccaggagctgggattt
ggcgatgttgaaccggataatattcgggatattttagctcaacgttaccagggttctcga
tatagttttggctacccagcttgtcccaacatttccgatcaacacaagcagttacaatta
ttagatgctaataggatgggtatgtatatggatgaaagtgaacagttgtatcctgaacag
tctacaactgcaattattgcttatcatccgacagctaagtattttacggcttaa
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