Cylindrospermopsis raciborskii: L3I90_13585
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Entry
L3I90_13585 CDS
T08337
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk01501
beta-Lactam resistance
crk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L3I90_13585
01503 Cationic antimicrobial peptide (CAMP) resistance
L3I90_13585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crk02000
]
L3I90_13585
01504 Antimicrobial resistance genes [BR:
crk01504
]
L3I90_13585
Transporters [BR:
crk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
L3I90_13585
Antimicrobial resistance genes [BR:
crk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L3I90_13585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UJS04118
LinkDB
All DBs
Position
complement(3083192..3086425)
Genome browser
AA seq
1077 aa
AA seq
DB search
MSNIHKSFSISALSIRQHIGTLMLTLAVIVMGVFFILRLPVDLLPSITYPRIGVRIEAPG
ISPEVAVDEITKNLEEAFSATEGVIQVVSRTREGQVSLDLYFQPGGNIDQALNDATATFN
RTRNRLPETIEEPRLFKFDPSQLPIYEFALTSPTLKGVDLRVFAEEELGRELGLVPGVAL
VDVSGGVEEEVRVNIDLDRLQALGVGLTDVLNELRNRNQDISGGRILGSNSEPLTRTVGR
FKNAQEINDLSLEVSTPNSPSKNRVYLRDFAQVTDGAAKQRVYVLLNGEEAVKVSIQKQP
DANTVNVVDGIKEKITQLKQAGKIPEESTLTPTLDESIFIRNSLANVTTSGLIGAGLAGF
AVLLFLGSLRQTLIIVISIPLATLAAIIFMGLFGLSINIFSLGGLALGVGIVVDNSIVML
ENITTGITHNKRQNRLGNLSANTIIEQAELSSREVESALIASTSTNLVAVLPFLLIGGFI
SLIFNELILTISFAVAASILIAVTVVPMLTSRLLGWPVPISLTNFWLFQQFNQQFAAATR
LYGKFLTGILRWRLLTIIMATLLLGGGSYWIAPQLKQEILPQINTGQVNLFAQFPPGTPL
KTNQKVMGLVDEIVGKQPETKYVFSTVGGFLFGSNSTANPLRSSSTITLKPGSDIESYIE
RVSKKFTELNLVDIRLRLTRGQVRGLLLSNSPARGADVDIILQGTDGDILEKKGRQLLAI
LEEKVTALRFRPDGDAKQPEIQILPNWERVTNVGLNTKEIGETIQTAITGSVPTQIQRDN
RLVDVRVELNEDALNTTSQLARLPLFTQGNQQVRLSDIATIITSKAPGEIQRINQRQVFL
IAGNLTEGASLNQALEQIDQVLNTVEFPPTVSVLPSATAESNRQIQQSLQVLGGLAIFLV
FIVMAVQYNSLVDPLVILFTIPLALAGGVFGLYITKTAVGATVIVGAVLLVGIVVNNAII
MVELANQIRERERIDRRTAILKAAPQRLRPILMTTITTVLGMFPLALGIGEGSEFLQPLG
VVVFSGLSVATLLTLFIIPCFYTLLHDLIGGGWKKDKWLKSSIARNKEMAEQISSKI
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatatccacaaaagttttagtataagtgccctatctattcgccaacatattggc
actttaatgctaaccctagcagtgattgtcatgggtgtatttttcattctacgattaccc
gtagacctattaccatctattacctatcctcggattggagtcagaatagaagcaccgggg
atttcaccagaagtagcagtggatgaaatcaccaaaaacttagaggaagccttttccgcg
acagaaggagtaattcaagttgtctcccgtactcgagaaggacaagtgagtttagaccta
tattttcaaccgggaggaaatattgatcaagctctcaatgatgctacagcaacttttaac
cgcaccagaaatagattaccagagaccatagaagaaccccggttatttaagtttgaccct
tcccaactacccatatatgaatttgctctcacctcacccacccttaaaggagtagattta
cgagtttttgccgaagaagaattagggcgtgaattgggtttagtaccaggagtcgcactg
gtagacgtatctgggggagtggaagaagaggtaagggtaaatattgatttagatcgttta
caagccctaggagtaggtttaacagatgtattaaacgaactgagaaatcgcaatcaagat
atttctggggggagaattttaggaagtaattccgaacccttaactcgcacagtggggaga
tttaaaaatgcccaggagattaatgatctttccttagaagtatccacgcctaattccccc
agtaaaaatcgggtttacctgagagattttgcccaagttactgatggtgcagcaaaacag
agagtttatgttttgctcaatggtgaagaagcggtaaaagttagtattcaaaaacaaccc
gatgctaatactgtcaatgttgttgatggaatcaaagagaaaataacccaactcaaacaa
gctggtaaaatacccgaagaatcaacattaacacccaccttagatgaatcaatatttatc
agaaactccctagctaatgttaccacctctggtttaataggtgcaggattagcaggtttt
gccgttcttttatttcttgggtccttacgacaaaccttgataattgttatttctattccc
ctagctacactagcagctattattttcatggggttatttggtttatcaataaatattttt
agcttgggtggtttagcattgggagtgggaattgtggtagacaattctattgttatgtta
gaaaatatcaccacaggtattactcacaataaaaggcaaaatcgcctaggtaacctatca
gcaaacacaattattgaacaagctgaacttagcagtcgagaagtagaatcagcattgata
gcttccacaagtaccaacctggtagcagtcttaccatttttgttaattggtggttttatt
tccttaatatttaacgaactaattctcaccattagctttgctgtagcagcttccatttta
atagctgttactgttgtacccatgttaacatctcgattattaggttggccagttcccatt
tccctaaccaatttttggttatttcaacagtttaatcaacaattcgcagctgctactaga
ttatacggcaaatttttaaccggaattttacgttggcggttattaacaattattatggct
actctcttattaggtggtggtagctattggatagcaccccagctaaaacaagaaattctc
ccccaaattaataccggacaggtcaatctgtttgcccaatttccccccggtactcccctc
aaaaccaatcaaaaagtcatggggttggttgatgaaattgtcggtaaacaaccggaaact
aaatatgtgttttccactgttggtggatttctctttggtagtaatagcacagccaatccc
ctacgcagttccagtacaattaccctaaaaccaggttcagatatagaaagctatattgag
cgggttagtaaaaaatttaccgaactaaacttggttgatattcgactgcgtttaaccaga
ggacaagtaaggggtttattgcttagtaactcacccgctcgtggtgcggatgtggatatt
atcctccaaggaaccgatggggatatcctagaaaaaaaaggtcgtcagttattagcaatc
ctagaagaaaaagtgaccgccctgagatttcgtcccgatggagatgctaaacaaccggaa
atccaaattctacccaactgggagcgagtgacaaatgtggggttaaacactaaagaaatt
ggagaaacaattcaaacagctattacaggtagtgtccccacccaaatacaacgagataat
cgattagtggatgtgcgagtggaattaaatgaggatgcgctaaacactacttcccagttg
gcaagactacctttattcacacaaggtaatcaacaagttagactaagtgatatagcgacg
atcattactagtaaagcaccgggagaaatacaacggattaaccagcgtcaagtattttta
attgcaggtaatttaaccgaaggagctagtttaaatcaagccttagaacagattgatcag
gttttaaatactgtagagttccccccaaccgtgagcgtcttacccagtgcaacagcagag
tctaatcgccaaattcaacaatcactacaagtcttaggtggtctggccatattcttagta
tttattgtcatggctgtacaatataattcccttgtagatccattagtcattttatttacc
atacctctagccctagctggaggtgtttttggtctttatattaccaaaactgctgttggt
gcaaccgtaattgtgggtgcggttttattggtaggaatcgtggtaaataatgccattatt
atggtagaattggctaatcaaatcagggaaagggaaagaatagaccgtcgcaccgctatt
ttaaaagcagcaccccagcgtctacgcccaattctaatgacaacaattaccacggtttta
ggcatgtttcccctagcattaggcattggcgaaggatctgaatttctccaacccctgggc
gtagtggtgttttctggtttgtctgtagccaccttattgaccctatttattatcccatgt
ttttacacccttttacatgatttaataggaggtggttggaaaaaagataagtggctaaaa
tcatctatagccagaaataaagaaatggctgaacaaattagctcaaagatctag
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