Cylindrospermopsis raciborskii: L3I90_13590
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Entry
L3I90_13590 CDS
T08337
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk01501
beta-Lactam resistance
crk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L3I90_13590
01503 Cationic antimicrobial peptide (CAMP) resistance
L3I90_13590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crk03036
]
L3I90_13590
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crk02000
]
L3I90_13590
01504 Antimicrobial resistance genes [BR:
crk01504
]
L3I90_13590
Chromosome and associated proteins [BR:
crk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
L3I90_13590
Transporters [BR:
crk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
L3I90_13590
Antimicrobial resistance genes [BR:
crk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
L3I90_13590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Fez1
Motif
Other DBs
NCBI-ProteinID:
UJS04119
LinkDB
All DBs
Position
complement(3086461..3087825)
Genome browser
AA seq
454 aa
AA seq
DB search
MVLVPNESRITVKVLSIIPSGSWLSQISHHRDKILLVSVLFLGILATGCVSTVKESAEAQ
SQNSSGKRSAKPISVDVAIARTDSLNQKLIYTGSTVPRKIISVRSQVEGRLIGLDLEIGD
RVSKGQRVGRLDDILLKTGLEQQEAELGNRESEVERARIQVGNIEAEVEKVRLELMQAKS
DSDRQQKLLQEGAISQQAAQQAVTKVKTYQQILKSTIEKQRTENKAVAAAQNRVLAQRAV
VKAARERLSYTDLISPITGVVTEKITEPGNLLQSGNEVIKIADLSQIKVVVKVSELELGK
VEIGQRVEVNLDAFPDEKIIGRIERISPVADSTARVVPVEIVIPNSQGKIRSGMLARVNF
SRQESSRVVVFKTAINNQDQETSSPNNNSTIFVIERNEKRVKVKEKPVVLGKEADGKIEI
ISGIQPGDSYVVRSSKPLENGQRVKLSALSELPN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggttttagtcccaaatgagtcacgaataacagtaaaggtattaagtatcataccatct
gggtcatggctgagccaaatcagccatcatagagacaagatattactggtgtctgttttg
tttctgggaattttggcaactggctgtgtttccacggttaaagaatcagcagaagctcaa
tctcaaaattcatccggaaaaagaagtgctaaaccaatatccgtagatgtggcgatcgcc
cgaacggactccctaaatcaaaaattaatttatacaggtagtacagttcctaggaaaata
atatccgtgcgatcgcaagtagaggggagactaattggtttagatttagagattggggat
agggtaagcaaaggacagagggttggtagactagatgatattttgttgaagacgggatta
gagcaacaggaagcggagttaggaaatcgtgaatcagaagtagagcgagccaggatccag
gtaggaaatatagaagcggaggtagaaaaagttagattagaactgatgcaagcgaaatct
gactcagacagacagcagaaactattacaagaaggggcgatttcccaacaagctgcccag
caggctgtgacaaaagttaagacatatcaacagattttgaaatcaaccatagaaaagcaa
agaacagaaaacaaagcagtagcagcggcgcaaaatagagtcttagcccagagagcagta
gttaaagcagccagagagcgtctttcgtatactgatttaatttctccgattacaggcgta
gtaacagaaaaaatcacagaaccagggaaccttttacaatcagggaacgaagttataaaa
attgccgatttaagtcagatcaaagtagtggtaaaagtttcagaattagaactggggaaa
gtggaaataggtcagagggtagaagtaaatttagatgcttttcccgatgaaaaaatcata
ggtagaatagaaagaatttcaccagtagcagatagcacagctagagtagtgcccgtagag
atagtcattcccaatagccagggaaaaattcgtagtggaatgttggccagagtcaatttt
tccagacaagaatcatcaagggtagtggtgttcaaaacagcaattaataatcaagaccag
gaaacatcatcaccgaataataacagcaccatttttgttattgaacggaacgaaaagaga
gtaaaagttaaagaaaaaccagttgtgttgggtaaagaagctgatggcaaaatagaaatt
atctctggaatacaaccgggagacagttatgtagttcggagtagtaaaccccttgagaat
ggtcaaagggttaaattatcagcactgtcagaattaccaaactaa
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