Carnobacterium sp. 17-4: CAR_c10440
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Entry
CAR_c10440 CDS
T01452
Symbol
nth1
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
crn
Carnobacterium sp. 17-4
Pathway
crn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAR_c10440 (nth1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crn03400
]
CAR_c10440 (nth1)
Enzymes [BR:
crn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CAR_c10440 (nth1)
DNA repair and recombination proteins [BR:
crn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CAR_c10440 (nth1)
Prokaryotic type
CAR_c10440 (nth1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AEB29737
UniProt:
F4BQD2
LinkDB
All DBs
Position
1078632..1079270
Genome browser
AA seq
212 aa
AA seq
DB search
MLPKTQTIQMIEAMGNLFPHATCELVHKNAFELLIAVMLSAQTTDVSVNKITPELFRKYP
TPEAFLDAPVEDIMEQLKTIGLYRNKAKFIKGCCRKLIDEFNGMVPNKRSELESLPGVGR
KTANVVLSVAFNLPAIAVDTHVERVTKRLGICPPKATVREVEEILMQQLPKELWSIAHHR
LIFFGRYQCTARNHDHDICIQLLKENSPAKVQ
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgctacctaaaacgcaaacaattcaaatgattgaggcaatgggaaatttgtttcctcat
gcaacttgcgaacttgttcataaaaatgcttttgaattattgattgctgttatgttaagt
gcacagaccacagatgtttctgtaaataaaattacaccagaactgtttcgtaaataccct
acaccggaagcctttttagatgcgcctgtagaagacattatggaacagttaaaaacgatt
ggtttataccgtaataaagcaaaatttattaaaggctgttgccgtaagttgattgatgag
tttaatggaatggtcccaaataaaagaagcgaattagaatctttaccaggtgtgggtaga
aaaacagcgaacgttgtcctgagtgtggcatttaatctcccggcgattgctgtggataca
catgtagaaagggtgacgaagagattgggtatctgccctccaaaagctactgttcgtgaa
gtggaagagatcttgatgcaacaactaccaaaagaactttggagcattgcgcatcataga
ctaatcttttttgggcgctatcagtgtacggcaagaaaccacgatcatgatatttgtatt
caattgttgaaagaaaatagccctgcaaaagtacaataa
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