Citrobacter rodentium: ROD_08651
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Entry
ROD_08651 CDS
T01145
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cro03009
]
ROD_08651 (rumB)
Enzymes [BR:
cro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
ROD_08651 (rumB)
Ribosome biogenesis [BR:
cro03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ROD_08651 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Methyltransf_4
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
CBG87641
UniProt:
D2TR54
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Position
951606..952733
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AA seq
375 aa
AA seq
DB search
MHCALYDAGRCRSCQWLTQPPGEQLSAKMADLHHLLAGFPVAEWCAPVSGPERAFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARRRG
ELKYLLLTESQLDGGMMLRFVLRSENKLAQLRAALPWLQAQLPQLKVISVNLQPVHMAIM
EGEREIFLTEQQALAERFNNVPLWIRPQSFFQTNPTVASRLYATARDWVRQLPVTHMWDL
FCGVGGFGLHCATPEMRLTGIEISPEAIACATQSAAELGLTNLQFQALDSTRFATAQESV
PQLVLVNPPRRGIGKALCDYLGKMAPQFIIYSSCNAQTMAKDIASLAGYRIERVQLFDMF
PHTAHYEVLTLLIRN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcactttatgacgctggccgctgccgctcctgccagtggctcacgcagccg
ccaggcgagcagctctccgctaaaatggccgatcttcaccatctgcttgccggtttcccg
gtggcggagtggtgcgcgccggtcagcggcccggagcgggcctttcgcaataaagcgaaa
atggtggtcagcggcagcgtagaaaaaccgctgctcgggatgctgcatcgcgacggaacg
ccggaggatctgtgcgactgtccgctgtatcccgcgtcctttgctcctgtttttgccgcg
ctgaagccgtttatcgcccgtgcggggttaacgccttataacgtggcgcgcagacgcggc
gagctgaagtatcttctgctgaccgaaagccagctggatggcgggatgatgctgcgcttt
gttctgcgctcggaaaataagcttgcccaactgcgcgccgcgctgccgtggctacaggcg
cagctaccgcaactgaaggtaatcagcgtcaatttgcagccggtgcatatggcgattatg
gaaggggagagagaaattttcctgaccgaacagcaggcgctggcggagcgttttaacaat
gtgccgctgtggatccgcccgcaaagcttcttccagaccaacccgacggtggcgagtcgg
ctgtacgccacggcgcgtgactgggtgcgtcagctgccggttacgcatatgtgggatctg
ttctgcggcgtcggtggctttggtctgcactgcgccacgccggagatgcggctaaccggc
attgagatctcccccgaggcgattgcctgcgcgacgcaatctgccgctgaactgggatta
acaaatttgcagtttcaggcgctggactccacccggttcgccaccgcgcaggaaagcgtg
ccgcagctggtgctggttaatccgccgcgtcgcggcatcggcaaagcgctgtgcgactat
ctcggtaaaatggcgccgcaatttattatttattccagctgcaatgcgcagacgatggca
aaagatatcgccagtttggcgggctatcgcatcgaacgcgttcagcttttcgatatgttc
ccccataccgcgcattatgaagtattgacgctgttgatcagaaactaa
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