KEGG   Caenorhabditis remanei (nematode): GCK72_001705
Entry
GCK72_001705      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GCK72_001705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_001705
   03041 Spliceosome [BR:crq03041]
    GCK72_001705
   03032 DNA replication proteins [BR:crq03032]
    GCK72_001705
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     GCK72_001705
Spliceosome [BR:crq03041]
 Complex A
  U1 snRNP components
   Sm proteins
    GCK72_001705
  U2 snRNP components
    GCK72_001705
 Complex B
  U1 snRNP components
    GCK72_001705
  U4/U6.U5 tri-snRNP components
    GCK72_001705
 Complex C
  U2 snRNP components
    GCK72_001705
DNA replication proteins [BR:crq03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     GCK72_001705
SSDB
Motif
Pfam: LSM Izumo-Ig
Other DBs
NCBI-GeneID: 9819226
NCBI-ProteinID: XP_053591731
UniProt: A0A6A5HPP8
LinkDB
Position
I:complement(8425182..8425694)
AA seq 151 aa
MMAHLNYRMKIILQDGRTFVGFFKAFDKHMNILLAECEEHRQIKPKAGKKADGEEKRILG
LVLLRGEHIVSMTVDGPPPRDDDSVRLAKAGGAGGPGQAKPGGRGMPAMPGMQGMPPGPP
GGLSGAMRGHGGPGMASMQPGYGAPPGGRPY
NT seq 456 nt   +upstreamnt  +downstreamnt
atgatggctcatctcaactaccgaatgaagataattcttcaagacggtagaacgttcgtt
ggtttcttcaaggcctttgacaagcacatgaacattttgctcgcagagtgcgaggagcac
agacagatcaaaccaaaggccggcaaaaaagcagacggagaagagaaacgaattctcggt
ttggtgcttctccgcggggaacacatcgtctcaatgactgtcgatggaccaccaccgaga
gatgacgactctgtgaggctcgcgaaggctggaggagcaggcggacccggacaagccaaa
ccaggaggccgtggaatgccagcgatgccaggaatgcaaggaatgccaccaggaccacca
ggtggactctctggagctatgcgtggacacggtggacctggcatggcatcgatgcagcca
ggatacggagccccacccggaggacgtccatattaa

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