Caenorhabditis remanei (nematode): GCK72_003598
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Entry
GCK72_003598 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13141
integrator complex subunit 4
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_003598
Spliceosome [BR:
crq03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
GCK72_003598
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT
SCD
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
9805779
NCBI-ProteinID:
XP_053592785
UniProt:
A0A6A5HU73
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All DBs
Position
I:17150148..17155266
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AA seq
1097 aa
AA seq
DB search
MLTRAPRKREGDDGDGKPNLAQPPEKKSKLPERRFRKRRLQEVLNELCYRVQSNDRQLTN
NLIRELDTEHVRVISGRDFERSCMKMLKAALTAKIDSVSTKMFACLVSMFSRGSLERRKN
FIKSLHEICEGLAKATKEAAKINAIIVTSRQDTPARTGAPSTSTKTPEAPKPSEDGSESD
SSVDELPLKKPENPFRVEKIAPSRSGLEEEMEEISMIDAFYQKPNLDCGVLGLYTMALRE
GIVETVDIPEKVRLIARRSLAHSSISTTPNRIAALELHVAMAISYTTAFPTSDDVDFQHF
QARECEDTLNRLSGDRDFRVRKAVSEGLLELTSVAKLSKYTYPTAKMFIRDADSDIRITA
IRLLIYYAKLYGMESWEDESMTKKTTISDDAFSAICDAMNDIEIAVRVEAAQKLGDFETV
SEDLIYQTLDKKMMRSGANKQVVKVEQSLFALSKKAHTQKDRRWKFAKKAPKQAETRGGW
SRGKELNAACPGEEEKKKEENEEKEAESIIPHGACGAFVSALEDEFMDVRKAAVYSLGRL
ACNRPGFAVSALEYLADMFNDEIAGVRLDAINALTPLIAHGQLNAEQLNVILKCLDDAMP
DSRQAMRELLKRAQFTDVNCVEMCVKALLACMKRFPKDKEQVYGCVAEIGRNHAVQVQSI
MRSLLDIHLIFHTREPSIEDQDYVGKLIMVLNAASCQPSLVHFMPEFVHRHYRFLRNAFP
NIVRAIRVIDEEKQIGRLKKMDAVTNEKAEEVVLNTYQRLCDVASTAHLSDRHIQRDDIF
RDSTAISLYNASVSGAARLIFCLGEVSSTVDSVTDTVLRGGELTNVKQLISQSIEDMQSI
EHQFSGVSNQILSYLIYCRVYLSFLDMLVWMMQVMAPQSDVIKSGQEICKAARLAIEDHP
VISTTLTSFISASESLFFPPVQIPLNQNSNSLEDNKRKIITPISLVNLLNQSMPILPPKF
PKVSAIHLKYAKITAPNRDTAVEETLKFYAHLPHGMLLEFELYNMKQTELEAIRVKTTHP
DGRCDVMKPRVDEFREESGHFCVSTQLKISCSGPWAEAAEIEVVIGILNGNAFVPLFASP
SCFSPAHIRVRIHPHSR
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaagagctccgcggaaacgggaaggcgatgatggtgatggcaaaccgaatctc
gcccagccacctgaaaaaaagagcaaacttccggagagacgattcagaaagcgacggtta
caagaagtgctcaacgagctttgttacagagtgcagagtaatgatagacaattgacgaat
aatctaatccgggagttggatacggagcatgtacgtgtcatctccggacgtgatttcgag
agaagctgtatgaaaatgctcaaggctgcgttgacagcaaaaattgattccgtctccaca
aaaatgttcgcctgcctcgttagtatgttctctcggggttctctggaaagacgaaagaat
ttcataaaatctcttcatgaaatatgtgaaggactagcgaaagccacaaaagaagctgca
aagatcaacgcaatcattgtgacatctcgacaagacactccagcaagaactggcgctccc
tcgacgtcaacgaagactccagaagcaccaaaacccagcgaagatgggtctgaatctgac
tcttctgtcgatgaacttcctctcaagaaaccagaaaatccatttcgagtcgaaaaaatc
gctccgagtcgctctgggttggaagaagaaatggaagagatctcaatgattgacgctttc
tatcagaagccgaatctcgattgtggagttcttgggttatatacgatggcgttgagagag
ggaatcgttgaaactgtggacattccggaaaaagtacgcctgatcgctcgccgctctctt
gctcactcctccatctccaccacccccaatcgtatcgctgctctcgaactccacgtggca
atggctatttcctacactaccgcctttccgacttcagatgacgtggattttcagcatttt
caagcaagggagtgcgaagatacactgaatcggttatcaggtgatcgtgattttcgagtg
agaaaagcggtttccgagggtcttctggaactgaccagcgtggcgaagctatcaaaatac
acttatcccacggcgaagatgtttattagagatgcggattcagatatcagaattacagcg
attcggctgttgatttactatgcaaagttgtatggaatggagagttgggaagatgagtcg
atgacaaagaagacgacaatttcagatgatgcattttcagccatctgtgatgcaatgaat
gacattgagatagctgtaagagtggaggctgcacagaagctaggagatttcgagacagtt
tctgaagacttgatatatcagacacttgataagaaaatgatgagatctggagccaacaag
caagtcgtcaaagtagagcaatctctattcgctttatccaaaaaggcgcacacccagaag
gatcgtcgttggaagttcgccaaaaaggcgccgaaacaggcggaaacccgtggcggatgg
tcacggggaaaggagttgaatgcggcgtgtcctggagaggaggagaagaagaaagaggag
aatgaggagaaagaggcagagagtattatacctcatggagcgtgtggtgcattcgtttca
gcgttggaggatgagtttatggatgtccgaaaagctgcagtctactcccttggccgtctc
gcgtgcaaccggccaggattcgctgtatccgccctggaatatctcgctgatatgttcaat
gacgagatcgccggtgtccgtttggacgcaattaacgcgttgacgccactaattgcgcat
ggtcaattaaatgccgagcaattgaatgtgattctgaaatgccttgacgacgcgatgcca
gattctcgtcaagcgatgagagagttgctgaaaagagctcaattcactgatgtgaactgt
gtagagatgtgtgtaaaggcgttgttggcttgtatgaagagatttccgaaggataaagag
caagtatatggatgtgtggctgaaattggaaggaatcatgcggtacaagtacaatccatc
atgagatctctgctcgatattcatttgatattccacacgagagaaccatcgattgaagat
caagattatgtggggaaactgataatggtgttgaatgcggcaagttgccaaccatcactt
gttcactttatgcctgaattcgttcatcgacattatcgatttttgagaaatgcgtttccg
aatattgtacgcgcgattcgagtgatagatgaggagaaacagattggaaggttgaagaag
atggatgcggtgacgaatgagaaggccgaggaggtcgtgttgaacacttatcagagacta
tgcgacgtggcatcgaccgcccatctctccgaccgacacatccaacgagacgacatcttc
cgtgactctacagccatctccctctacaatgcgtcagtctccggtgccgcccgtctcatt
ttctgtcttggagaagtgtcatctaccgtggattcagtaaccgatacagtactccgtggc
ggggaattgacgaatgtcaagcagttgatatctcagagtattgaggatatgcaatcgatt
gagcatcaattctcgggagtttccaatcaaattctctcgtatcttatctattgtcgagtc
tatctctcgtttttagatatgttggtttggatgatgcaggtaatggcgccacaatctgat
gtgataaaatctggtcaagaaatttgtaaagcagcacgactagccatcgaagaccatcca
gtaatctccacaactctcacctccttcatctctgcatctgaatctcttttcttcccgccc
gttcagattccattgaatcagaattcgaattctcttgaagacaacaaacgaaaaattatc
actcccatctcgctcgtcaatcttctcaatcaatccatgccaattttgcctccgaaattc
ccaaaagtctccgcaattcatctcaaatacgcgaaaattacggctccgaatcgcgacacc
gccgtcgaggagacactgaaattttatgctcatttaccacatggaatgttgttggaattc
gaattgtataatatgaaacagacagaattggaggcgattcgagtgaagacgacacatcca
gatgggcggtgcgatgtgatgaaaccgagagttgatgagtttcgtgaggagagcggacac
ttttgtgttagcactcagttgaaaatctcgtgctccggtccgtgggcagaagcagccgaa
atcgaggttgtcatcggaatcctcaatggaaatgcattcgtcccactgttcgcttctccg
tcttgcttctcaccagcccacattcgagtcagaattcatccacattcccgctga
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integrated database retrieval system
