Caenorhabditis remanei (nematode): GCK72_005826
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Entry
GCK72_005826 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GCK72_005826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_005826
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
crq04990
]
GCK72_005826
Membrane trafficking [BR:
crq04131
]
SNARE
SNARE associated proteins
Others
GCK72_005826
Domain-containing proteins not elsewhere classified [BR:
crq04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
GCK72_005826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
zf-RING_15
Motif
Other DBs
NCBI-GeneID:
9800114
NCBI-ProteinID:
XP_053589551
UniProt:
A0A6A5HHM2
LinkDB
All DBs
Position
II:complement(10421551..10427147)
Genome browser
AA seq
966 aa
AA seq
DB search
MFRRLNKHSTSMTPAPAPTPAQKQRQEKIRLDLQKELDNVVKAAIASPHSKRENVPSEIT
QNLCNSIEAIFIHGLRDPFFLKGTRYAKYPEPNFWPFVSKFSHRSITNQISCLGQVRTEI
GKSRAWIRIVLNENALSQYLDLLATEITAIQQFYSDEAFLRLLTNSEHSERIRGLLKPLT
SLPISAATNSSFLNTWTPTPLILAGLMTGEPLKVGVLKARPNPKPAHLTEEIAIPAIDAL
VSEEDQEIGSPAYVERQRKRTSSRPIKRPDNDDHSECSSVYSHPSMLDSGEMSYQHAVVG
SLKKNPSSSGGMRRVSSNQRIQLPQSPLFSSTPVDTTILDQVKITKRSSDFVQVVSDVAS
NAPLGSKPLIISRRIRRPSKQKSNSRSSSEASREEYQRTKAISTRESRANSDLPSTIFGT
VPNDVAFSPEVCEGEIKSKPISVTIDSGIAEMASSSAGGTRKTSEIEPDTLEERTGIEER
SLSFIEALHELASTVEEEVPAPRSISLTDDVISQKQEEEETPIELENSVIEDDREVFDVS
MDEEEGTAAQPSDPVVTRSKPVTIQGGSRRQLIHRTQQKADSILGTSLRDELLEALPCTD
NDTFEHGVPIYVQSPGLMGNSLAAIGARHQMWESNSDHLSSSSDSGGPVVSFGQALRSAM
ETRGGNDDSHVMTESLGTSSQDLADNDEGIDDVNSTDESRKSSVSSEIAEKLCRIPREKG
LDSQDFRCAMCRKTIGGSFFSKFETCAIDSKYYCPECMKTGGKVSIPARVVMDWDWRERA
VSDRGRAWYEANQEKALINIKTSNPRLYSHVPALEETRKLREKLHLVSMYLFTCRESVAE
DFRRRLWPKEYLRSDIDLYSFADLMDVKSGSLQRRLKNLLKHSMNHVVACTLCKQKGFCC
ELCSVNEVIYPFNTESTHRCRVCFSVFHNECWRTSGECPKCIRRQNFEARRAQIDDPHNT
LLVLQP
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgttcagacgattgaataaacattctacctcgatgacgcctgctccggcaccgacaccg
gctcagaaacaaagacaagaaaaaatacggttggatttacaaaaagagctcgataatgta
gtaaaagcggcaatcgcatcgcctcattcaaaaagagagaatgtacccagtgaaataact
cagaatttatgcaattctatcgaagcaattttcattcacggactacgtgatccttttttt
ctgaaaggaacaagatatgcgaagtatccggaacctaatttctggccttttgtttccaag
ttttcacatcgatcaatcactaaccaaatctcatgcctgggacaagtccgcactgaaatt
ggcaagagtcgagcatggattcgaattgttctgaatgaaaacgctttgagtcaatacctt
gatttgctggcaacagaaataaccgctattcaacaattttattccgatgaggcatttctc
cgacttcttactaactccgaacactctgaaaggatacgtggtcttctgaagccgttgaca
tcacttcccatttctgcagccactaactcttcgttcctgaatacttggacgcccactcct
ttgattttggctggtctaatgactggagagccgttaaaagtcggggttttgaaagcccga
ccaaatccaaaacctgctcatttgactgaagaaattgctattccagcaattgatgccctg
gtgtctgaagaggatcaagagataggatcgcctgcttacgtagagagacaaagaaaaagg
acatcgagtagacctatcaaacgcccagataacgacgatcactcagaatgttcttctgtc
tattcacatccttctatgttggattctggtgaaatgtcatatcagcatgcagttgtcgga
agtcttaaaaaaaatccctcgtcttctggtggaatgcgacgtgtatcatctaatcaacgt
attcaacttccgcaatcacctctattctcctcaacacccgtggataccacaattctagat
caagtaaaaatcacaaaaagatcatctgattttgttcaagtggtttcggatgtagcttcg
aacgcgcctctcggatccaaacccctcatcatttctagaagaattcgaagaccatctaaa
caaaagtctaattcaagaagttctagtgaagcttctcgagaagagtatcaaagaactaaa
gctatatcaacgagagaatccagagccaacagtgatttgccatctacaatattcggtaca
gttccaaacgacgtagcattttcaccagaagtttgcgaaggagaaataaaatccaaacca
atttctgtcacaatcgacagtggaatcgctgaaatggcttcatcttctgcaggcggaaca
agaaaaacatcagaaatagaacccgatactctcgaagaaagaactgggattgaagaaaga
tctttatcgtttattgaagctttgcatgagttggcatctacagttgaagaagaagttcca
gcaccgaggagcatttcattaactgatgatgtcataagtcagaaacaagaagaagaagaa
actccgattgaattagaaaatagtgttattgaggacgatagggaagtttttgatgtgtca
atggacgaggaagaaggtactgctgctcaaccttccgaccccgtagtgactcgaagtaaa
cctgttacaattcaaggaggaagtcgacgacaattaatacataggacacaacaaaaggct
gattcaattctcggaacttcacttcgcgatgaacttttggaagcattaccttgtactgac
aacgacactttcgaacacggagtcccaatatatgtacaaagtcccggattgatgggaaat
tcgcttgcagcaattggagcgcgacatcaaatgtgggaatcgaattctgatcatctttct
tcatcttctgattctggtggaccagttgtcagcttcggacaagctctacgatcagcaatg
gaaactcgcggaggaaatgatgactcacatgtaatgacagaatcccttggtacttccagt
caagatcttgctgataatgatgaaggtattgatgatgtgaactcgacagatgagtctaga
aagtcatcagtatcttctgaaatcgcagaaaaactgtgccgaattccgagagaaaagggc
ctggactcacaagattttcggtgcgcaatgtgtcgaaagacgattggcggttctttcttt
tcaaagttcgaaacatgtgcaatcgacagtaaatactattgtccggaatgtatgaaaacc
ggtggaaaagtttcgattcccgctcgggttgtaatggattgggattggagagaaagagca
gtttctgatcgaggacgtgcttggtatgaagcaaaccaagaaaaggcacttatcaacatt
aaaacttcaaatcctcgtctgtattcacatgttcctgcactcgaagagactcgaaaactt
cgagaaaagctgcatctagtctcaatgtatctatttacatgtcgcgaatcagttgcagag
gatttccgacggcgattatggccaaaagagtatcttcgatcagatattgacctttactca
tttgccgatttgatggatgttaagagtggttcccttcagagacgactcaaaaatttactg
aaacattcaatgaatcacgttgtggcgtgtacattgtgtaaacagaaaggattctgttgc
gaattgtgttcagtaaatgaggttatttatccgttcaatacggaatcaactcataggtgt
cgtgtttgtttctcagtgttccacaacgaatgttggcgtacttccggtgaatgtcccaaa
tgcatccgtcgtcaaaactttgaagctcgacgcgcccaaatcgatgatccccacaatact
ctgcttgttctccagccataa
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