KEGG   Caenorhabditis remanei (nematode): GCK72_006568
Entry
GCK72_006568      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K23609  guanine nucleotide exchange protein C9orf72
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:crq00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    GCK72_006568
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crq04131]
    GCK72_006568
Membrane trafficking [BR:crq04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    GCK72_006568
SSDB
Motif
Pfam: C9orf72-like
Other DBs
NCBI-GeneID: 9811264
NCBI-ProteinID: XP_003113885
UniProt: E3LRQ1 A0A6A5HFC6
LinkDB
Position
II:complement(13105094..13107855)
AA seq 734 aa
MEADEYFTTYDALKDQQKKEHAVRRQLPLKTSENCGIMKIVWSQFDFMTGPELKFVWDVT
PSTSISPVNLSGEDGSIADGESLMDSSGSNQSVSFEEIDDPLKIELTILDGLDANLVDSF
NALDMMNAGDYKYKTMKYLDEYMTDSATTSTKTLTMDDSRITDSPESSGKSLRDEGLDHC
CEGKFLEDDKLGTSFTLASPSPNDTGHLGKLLASKYPNEEDRELAEYLRDKIASTSTAIP
TNECVAHLTEHYELDRLSPITNDDELRRSCVDSGVGVSTHSDLSAMCQSPQSGNSTRRFE
DAFGMMTSTPNPNVFKFRDEREQTNTPPPRDIFDFFDDQIDFGETYVTDEAFVAKCVLAE
LICNAPHSRCPLQHKLIVSPSRHLLVAAFIFSAQTRTGSTITYAISFLMSHLKQEWYLDR
HSWFERMVGDSVPKMKASLFSEDSDDVLVRVTSELSRLLSLLSALERFPLVSQDRPLMIK
NTLFADKGTSLSENRILAKAISGCLQSQGHTVIIGSDHVLVARLLYTLAFFVPEAHQWCC
LRPYRHKYNPYLRLQGVRRAELPSVIMSGTSSPWPICIIDLDRSAVCMSASYQKHRVLRA
RNDSRGVRLILEHAGVMTSKNTKVPQIELSPCRTLECVNSFLKQIDMLPMEESVRAGFCS
QLMLYFDNLSAAFIAFVRDASRPGVDEKECGTRSKSFSLSECRKSLDLTNDALFNAVLAR
AELLQPDISEFIYM
NT seq 2205 nt   +upstreamnt  +downstreamnt
atggaagcggatgaatattttactacgtacgatgcgcttaaagatcagcaaaagaaagag
cacgctgtgcgaaggcagctgccccttaaaacaagtgaaaattgcggaattatgaagatt
gtttggtcgcaattcgattttatgactggacctgaattgaaatttgtttgggatgtaaca
ccttccacttctatatcacctgtcaacctttctggagaagatggatcaattgcagacgga
gaaagtttaatggattcatctggatcgaaccaatcagtttcctttgaggaaatcgacgat
ccattaaaaatcgaattaacaattctcgatggattagacgccaatctagtggattcattc
aatgcactcgatatgatgaatgctggtgattataaatacaaaactatgaaatatctagat
gaatatatgacggatagtgcaacaacgagtacaaaaacgttgacgatggatgattctcga
ataactgacagtcctgaaagtagcgggaaatcattgagagacgaaggacttgatcattgt
tgtgagggaaagtttttggaagatgataaacttggaaccagttttactctcgcctcaccc
tctcctaacgatactggtcacctcgggaagttattagcgagtaaatatccgaatgaagaa
gatagagaactcgcagagtatttgagagacaagattgcatcaacttctacagcgatccca
acaaatgaatgtgttgcacatttgacagaacactacgaattggatcgattatcaccaatc
actaatgatgacgaacttcgtcgatcttgcgttgattctggtgtcggggtttcaacacac
agtgatctctcagcaatgtgtcaaagtccgcagagtggaaactcaacgagaagattcgaa
gatgcatttggaatgatgacatccactccgaacccgaacgtttttaagtttagagacgag
agagaacagacgaatactccaccaccgagagatattttcgacttttttgatgatcaaatt
gatttcggagaaacttatgtaacagatgaagcttttgtggcaaagtgtgttctggcagag
ttgatttgcaacgctcctcattcccgatgccctctacagcataaattgatcgtctcgcca
tctcgtcatcttcttgttgccgctttcattttttctgctcagactcgaacaggatcaaca
atcacttatgccatctcgtttctcatgtctcatttaaaacaagaatggtatctggatagg
cattcttggttcgagaggatggttggagattcagttccaaaaatgaaagcttcgttattt
tctgaagattctgatgatgtacttgttagagtcacctctgaattatctcgccttctttca
cttctttctgcattggaacgatttcctctcgtatctcaagacaggcctttaatgatcaaa
aacacgttgttcgccgataaaggaacatctttatctgaaaaccgaattctcgccaaagcg
atttccggttgtttgcaaagtcaagggcatactgttatcatcggatccgatcatgttctc
gtagcgagacttctgtacactcttgcattttttgttcccgaagctcatcaatggtgttgt
ctacgtccgtatcgtcacaagtacaatccgtatttgaggttgcagggtgtcagaagagcc
gaacttccatcagtaataatgagtggaacatctagcccatggcccatttgtatcattgac
ctggatcgatcggcagtttgtatgtcagcctcatatcaaaaacatcgagtattgagggca
cgaaatgattctcgaggagttcgtttgattcttgaacatgctggagtcatgacgtcgaaa
aatacaaaagttccacaaatagaactttctccatgccgaacactggaatgtgttaactcg
ttcctcaaacaaatcgatatgttaccaatggaggaatctgtgcgagctggattctgttct
caactgatgctctatttcgataatctatcagccgcatttatcgctttcgttcgagatgcc
agtcgtcccggagtagatgaaaaggaatgcggaacacgatcaaagtctttcagtttatcg
gaatgtcgaaaatcacttgacctcactaatgatgcactcttcaatgctgtattggcacga
gctgaattacttcaacccgatatttctgaattcatttacatgtag

DBGET integrated database retrieval system