Caenorhabditis remanei (nematode): GCK72_006568
Help
Entry
GCK72_006568 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GCK72_006568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_006568
Membrane trafficking [BR:
crq04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
GCK72_006568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
9811264
NCBI-ProteinID:
XP_003113885
UniProt:
E3LRQ1
A0A6A5HFC6
LinkDB
All DBs
Position
II:complement(13105094..13107855)
Genome browser
AA seq
734 aa
AA seq
DB search
MEADEYFTTYDALKDQQKKEHAVRRQLPLKTSENCGIMKIVWSQFDFMTGPELKFVWDVT
PSTSISPVNLSGEDGSIADGESLMDSSGSNQSVSFEEIDDPLKIELTILDGLDANLVDSF
NALDMMNAGDYKYKTMKYLDEYMTDSATTSTKTLTMDDSRITDSPESSGKSLRDEGLDHC
CEGKFLEDDKLGTSFTLASPSPNDTGHLGKLLASKYPNEEDRELAEYLRDKIASTSTAIP
TNECVAHLTEHYELDRLSPITNDDELRRSCVDSGVGVSTHSDLSAMCQSPQSGNSTRRFE
DAFGMMTSTPNPNVFKFRDEREQTNTPPPRDIFDFFDDQIDFGETYVTDEAFVAKCVLAE
LICNAPHSRCPLQHKLIVSPSRHLLVAAFIFSAQTRTGSTITYAISFLMSHLKQEWYLDR
HSWFERMVGDSVPKMKASLFSEDSDDVLVRVTSELSRLLSLLSALERFPLVSQDRPLMIK
NTLFADKGTSLSENRILAKAISGCLQSQGHTVIIGSDHVLVARLLYTLAFFVPEAHQWCC
LRPYRHKYNPYLRLQGVRRAELPSVIMSGTSSPWPICIIDLDRSAVCMSASYQKHRVLRA
RNDSRGVRLILEHAGVMTSKNTKVPQIELSPCRTLECVNSFLKQIDMLPMEESVRAGFCS
QLMLYFDNLSAAFIAFVRDASRPGVDEKECGTRSKSFSLSECRKSLDLTNDALFNAVLAR
AELLQPDISEFIYM
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggatgaatattttactacgtacgatgcgcttaaagatcagcaaaagaaagag
cacgctgtgcgaaggcagctgccccttaaaacaagtgaaaattgcggaattatgaagatt
gtttggtcgcaattcgattttatgactggacctgaattgaaatttgtttgggatgtaaca
ccttccacttctatatcacctgtcaacctttctggagaagatggatcaattgcagacgga
gaaagtttaatggattcatctggatcgaaccaatcagtttcctttgaggaaatcgacgat
ccattaaaaatcgaattaacaattctcgatggattagacgccaatctagtggattcattc
aatgcactcgatatgatgaatgctggtgattataaatacaaaactatgaaatatctagat
gaatatatgacggatagtgcaacaacgagtacaaaaacgttgacgatggatgattctcga
ataactgacagtcctgaaagtagcgggaaatcattgagagacgaaggacttgatcattgt
tgtgagggaaagtttttggaagatgataaacttggaaccagttttactctcgcctcaccc
tctcctaacgatactggtcacctcgggaagttattagcgagtaaatatccgaatgaagaa
gatagagaactcgcagagtatttgagagacaagattgcatcaacttctacagcgatccca
acaaatgaatgtgttgcacatttgacagaacactacgaattggatcgattatcaccaatc
actaatgatgacgaacttcgtcgatcttgcgttgattctggtgtcggggtttcaacacac
agtgatctctcagcaatgtgtcaaagtccgcagagtggaaactcaacgagaagattcgaa
gatgcatttggaatgatgacatccactccgaacccgaacgtttttaagtttagagacgag
agagaacagacgaatactccaccaccgagagatattttcgacttttttgatgatcaaatt
gatttcggagaaacttatgtaacagatgaagcttttgtggcaaagtgtgttctggcagag
ttgatttgcaacgctcctcattcccgatgccctctacagcataaattgatcgtctcgcca
tctcgtcatcttcttgttgccgctttcattttttctgctcagactcgaacaggatcaaca
atcacttatgccatctcgtttctcatgtctcatttaaaacaagaatggtatctggatagg
cattcttggttcgagaggatggttggagattcagttccaaaaatgaaagcttcgttattt
tctgaagattctgatgatgtacttgttagagtcacctctgaattatctcgccttctttca
cttctttctgcattggaacgatttcctctcgtatctcaagacaggcctttaatgatcaaa
aacacgttgttcgccgataaaggaacatctttatctgaaaaccgaattctcgccaaagcg
atttccggttgtttgcaaagtcaagggcatactgttatcatcggatccgatcatgttctc
gtagcgagacttctgtacactcttgcattttttgttcccgaagctcatcaatggtgttgt
ctacgtccgtatcgtcacaagtacaatccgtatttgaggttgcagggtgtcagaagagcc
gaacttccatcagtaataatgagtggaacatctagcccatggcccatttgtatcattgac
ctggatcgatcggcagtttgtatgtcagcctcatatcaaaaacatcgagtattgagggca
cgaaatgattctcgaggagttcgtttgattcttgaacatgctggagtcatgacgtcgaaa
aatacaaaagttccacaaatagaactttctccatgccgaacactggaatgtgttaactcg
ttcctcaaacaaatcgatatgttaccaatggaggaatctgtgcgagctggattctgttct
caactgatgctctatttcgataatctatcagccgcatttatcgctttcgttcgagatgcc
agtcgtcccggagtagatgaaaaggaatgcggaacacgatcaaagtctttcagtttatcg
gaatgtcgaaaatcacttgacctcactaatgatgcactcttcaatgctgtattggcacga
gctgaattacttcaacccgatatttctgaattcatttacatgtag
DBGET
integrated database retrieval system