KEGG   Caenorhabditis remanei (nematode): GCK72_009189
Entry
GCK72_009189      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GCK72_009189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crq03400]
    GCK72_009189
Enzymes [BR:crq01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GCK72_009189
DNA repair and recombination proteins [BR:crq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GCK72_009189
 Prokaryotic type
     GCK72_009189
SSDB
Motif
Pfam: HhH-GPD HHH DUF4254 HHH_8 RecR_HhH
Other DBs
NCBI-GeneID: 9818264
NCBI-ProteinID: XP_003103159
UniProt: E3ML16
LinkDB
Position
III:complement(5256456..5258967)
AA seq 296 aa
MKRLVTSSSTAVTVAADLEDTVVVKWRRDVDWIQKMRKDMMAPVDTMGCHKLADPLAKPE
VHRFQVLVALMLSSQTRDEVNAAAMKRLKDHGLSIEKILEFPVPDLERILCPVGFYKRKA
VYLQQTAKILVDKYSGDIPDSLDGLCSLPGVGPKMANLVMQIAWNKCEGIAVDTHVHRIS
NRLGWIKTDTPEKTRKALEILLPKSEWQPINHLLVGFGQMLCQPLRPKCSTCLCRFTCPS
STDKKMKKEESDEEAGPSEKPKKLKIEVEKEVKIEKIEEEESVEIEKPKKSRKATI
NT seq 891 nt   +upstreamnt  +downstreamnt
atgaaacgcctcgtgacgtcatcatccacggcggttactgtagctgcggatctcgaggat
actgtagttgtgaaatggagacgtgacgtcgattggattcagaagatgaggaaggatatg
atggcgccggtggatacgatgggatgtcacaagttggcggatccgttggccaagccggag
gtccaccgatttcaagtgctcgtcgccctgatgctctccagtcaaacccgagatgaagtc
aacgcggctgctatgaaaagacttaaagatcatggattatcgattgaaaagattctggag
tttcccgtaccagatttagagcgaattttgtgtccagtcgggttttataagcgaaaagca
gtgtatctccagcaaactgcgaaaattctcgtcgataagtattctggagacatcccggat
tcactagacggcctgtgctctcttccaggtgtcggaccgaaaatggcgaatttagtgatg
caaatcgcgtggaataagtgtgaaggaatcgctgtggatacgcatgttcataggatttcg
aatcgattaggctggatcaaaacggacactcctgagaaaacgcgaaaagcccttgaaatt
ttgctcccaaaatctgaatggcaaccgattaaccatcttttagtgggattcggtcaaatg
ctctgtcagccattgagaccgaaatgttccacgtgtctttgtcgattcacttgtcccagt
tcgacagataagaaaatgaaaaaggaggaatcggatgaggaggcggggccgagtgaaaaa
ccaaaaaaactgaaaatcgaggtggagaaggaggtgaaaattgagaaaattgaagaggaa
gaatcagtggaaattgagaaaccgaagaagtcaagaaaagccacgatatga

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