Caenorhabditis remanei (nematode): GCK72_014967
Help
Entry
GCK72_014967 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GCK72_014967
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crq01007
]
GCK72_014967
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crq03016
]
GCK72_014967
Enzymes [BR:
crq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
GCK72_014967
Amino acid related enzymes [BR:
crq01007
]
Aminoacyl-tRNA synthetase
Class I (U)
GCK72_014967
Transfer RNA biogenesis [BR:
crq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GCK72_014967
Prokaryotic type
Other AARSs
GCK72_014967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
9799494
NCBI-ProteinID:
XP_053585327
UniProt:
A0A6A5GVE0
LinkDB
All DBs
Position
IV:complement(<17851386..>17855201)
Genome browser
AA seq
1141 aa
AA seq
DB search
MSGLSTVPDNINFAKEEDKIAQKWKDENTFERSVELSKDRPHFTFYDGPPFATGLPHYGH
MLTSTIKDVVGRWAHQNGHYVERRFGWDTHGLPVEYEIDKTLGISGPQDVMKMGIANYNN
ECRKIVMRYSGEWEKTMGRLGRWVDFKHDYKTLYPWFMESVWWAFSELHKKGLVYKGVKV
MPFSTACSTPLSNFEAGQNYKDVVDPAVFVGFKLLDNPNRMLVAWTTTPWTLPSNLALVV
HPDMQYVVAKDKTTGIEYVVLEERLGELKNENLEVVEKLVGKQLKDLKYEPLFPYFAHMR
EERNAFRVLNDTFVTSDSGTGVVHQAPYFGEIDFQVCVNNGVIAKDQKMICPVDENGKYT
SEVKDYEGIYVKDADKLIMKKLKEMGNLVRQAECKHSYPFCWRSDTPLLYKAVPSWFIRV
ETLIPRLLANNDETYWVPSFVKDKRFANWLRDARDWAVSRNRFWGTPINLWVSDDGEEVV
CVGSIAELEELSGQKITDLHRESVDDITIPSRSGRGVLKRVSEVFDCWFESGSMPYAQNH
YPFENRKIFEDNFPADFIAEGIDQTRGWFYTLLVLSTALFNKPPFKNLICNGLVLASDGA
KMSKRKKNYPDPMEIVNKYGADALRLYLINSPVVRGENLRFREEGVRDLLKDVFLPWFNA
YRFFVQNVQAYEHETGNVFDMNAHVASENVMDRWIESFTNSLVGFVRKEMDAYRLYAVVG
PLTKFFDTLTNIYIRLNRKRVKGDNGLHEQHHALAALGRVLILIVRLMAPFTPFFCEYIW
QNLKKVIGASEESVHFLMLPKPDESLIDESVERRVEVMRNVIDLVRLVRDREGLAVKYPL
KEMVVINRDSQFLEDVKSLEPYVLLELNVRKLTVSQDKQKYGITLKAEPNFKILGARLKG
EQKKVADYLKNKITETELEQFLLEGKLTVLGHEISSEEVAVSYANGSDQGHGFKTHSDAK
TIVMIDTTEDESLVEEGLCREVTNRVQRLRKQAKLVSTDTAHVHIVVHPNDSQLAQVVAA
KLKDIESATGTPIKLGAPSASAKAPTATSKSAVKDSEVELWLFAEGDNFEGITVVDGTKK
VRVHLKTENEQLNGYADLLYHVRSALDQWNGKITLNNADGSRVHPTVDVNSLAGKTLQLA
R
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtctttcaaccgttccggataacatcaatttcgcgaaggaggaagataaaatt
gctcaaaaatggaaagatgagaatacattcgaacgatctgtcgaactctccaaagaccgt
ccacacttcactttctatgatggtccaccattcgctactggacttcctcattacggtcat
atgctcacgagtactatcaaggatgtagttggtagatgggctcatcaaaatgggcattat
gtcgagagaagattcggatgggatactcatggtcttccagtcgaatatgaaattgacaaa
actcttggaatcagtggtccacaagatgttatgaaaatgggaatcgccaattataataat
gaatgcagaaagattgttatgagatattccggggaatgggagaaaacgatgggtcgtcta
gggcgttgggtcgatttcaaacatgactacaaaaccctttacccctggttcatggagtca
gtttggtgggcattcagtgaattgcacaagaaaggactcgtatacaagggtgtaaaagtg
atgccattctccactgcatgttcgaccccactttcgaatttcgaagccgggcaaaactac
aaggatgtcgttgatccagctgtgttcgttggtttcaagttattggacaacccgaatcgt
atgcttgttgcatggacaaccactccatggactcttccatcaaacttggctcttgttgtt
catccggatatgcaatatgttgttgcaaaggacaagacgactggaattgaatacgtcgtt
ctcgaggaacgtctcggagaactcaagaatgagaatcttgaagttgtcgagaaacttgtc
ggaaagcaactcaaggatctcaaatatgaaccacttttcccatatttcgctcatatgcgt
gaggagagaaatgcattcagagttttgaatgacactttcgtcacttctgattctggtact
ggagttgtacatcaagctccatacttcggagagatcgatttccaagtttgtgttaacaat
ggagtcattgccaaagaccagaaaatgatctgcccagttgacgaaaacggaaagtacacc
tcggaagtgaaggactatgaaggaatatatgtgaaagacgctgataaacttattatgaag
aagctcaaggagatgggaaatcttgtgagacaagctgaatgcaagcactcttacccattc
tgctggcggtcggatactcctcttctctacaaagccgttccatcttggttcatccgtgtt
gagactcttattccaagacttttggctaataacgatgaaacttattgggtaccttcattt
gttaaggataagagattcgctaattggttgagagatgctcgtgattgggctgtctcgaga
aaccgcttctggggaactccaatcaatttgtgggtttcggatgatggagaagaggtggtt
tgcgtcggaagtatcgctgaattggaagagctctccggacaaaagatcacagatcttcat
agggaaagtgtagatgacatcactatcccatctcgttcaggacgtggagttctcaagcgt
gtatcagaagttttcgattgttggttcgagtctggatctatgccatatgcccaaaaccac
tatccattcgagaaccgaaagatcttcgaggataacttcccagctgatttcattgctgag
ggaattgaccagactcgtggatggttctacactcttcttgttctgtctactgctcttttc
aacaagccaccattcaagaatctcatctgcaacggtcttgttcttgcatctgacggagcc
aagatgtccaagagaaagaagaattatccagatccaatggagattgtgaacaaatatgga
gctgatgctctccggctttatctcatcaactcaccagttgtcagaggagaaaacttgaga
ttcagagaagaaggagtcagagatcttctcaaggacgtgttccttccatggttcaatgcc
tacagattctttgttcagaatgtgcaagcttatgaacatgaaactggaaatgtgttcgat
atgaacgctcatgttgccagcgagaatgtgatggatagatggatcgaatctttcacaaac
agtcttgtcggtttcgttcgcaaagaaatggacgcctacaggttgtacgctgtcgtcgga
ccactcaccaaattcttcgacactcttaccaacatctacatcagattgaacagaaaaaga
gtaaagggagacaacggactccatgagcaacatcacgcattggctgcgcttggacgtgtt
ctcatcctcattgttcgactgatggctccgttcactccattcttctgtgaatacatctgg
cagaacttgaaaaaggtcattggagcatcggaggaatctgttcatttcttgatgcttcca
aaaccagatgagagtctcattgatgaatcagttgagagaagagtggaggtgatgagaaat
gtgattgatctcgttcgtcttgttagagatcgtgaaggtcttgctgtgaaatacccattg
aaggagatggttgtcatcaacagagacagccaattcttagaagacgttaagagtctcgaa
ccatatgtccttcttgagttgaatgttcgaaaactgacagtatcacaggacaagcagaag
tatggaatcacactcaaagccgaaccgaacttcaagatccttggagctcgtctgaaggga
gaacaaaagaaggttgctgactacttgaagaacaagatcactgaaacagaattggaacaa
ttcctccttgaaggaaaacttaccgttcttggacacgagatctcttctgaagaagtggct
gtcagttatgcaaacggaagcgatcaaggacatggattcaagacgcattctgatgcaaag
actattgtgatgattgatactactgaggatgagtcacttgttgaggaaggactctgtaga
gaagttaccaacagagttcaacgtcttcgtaaacaagccaaactcgtttccactgatact
gctcatgttcacattgttgttcatccaaatgattctcaacttgcccaagttgttgctgca
aaacttaaagatatcgagtcagccacaggaacacccatcaagttgggagcaccatctgcc
tcggccaaggctccaacggccactagcaagagtgctgtgaaggattcagaagttgaattg
tggttgttcgctgaaggagacaatttcgaaggaatcacagttgtcgatggaaccaagaaa
gttcgtgttcatttgaagactgaaaatgaacaactcaatggatatgctgatctcctctat
cacgttcgatcggctctcgatcaatggaacggaaaaatcaccttgaataatgccgacggt
tcacgagttcacccaactgttgacgtgaattctctcgccggaaagacgcttcaactcgct
cgataa
DBGET
integrated database retrieval system
