Caenorhabditis remanei (nematode): GCK72_016605
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Entry
GCK72_016605 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05692
actin beta/gamma 1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03082
ATP-dependent chromatin remodeling
crq04145
Phagosome
crq04814
Motor proteins
crq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GCK72_016605
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
GCK72_016605
09142 Cell motility
04814 Motor proteins
GCK72_016605
04820 Cytoskeleton in muscle cells
GCK72_016605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_016605
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_016605
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_016605
03029 Mitochondrial biogenesis [BR:
crq03029
]
GCK72_016605
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crq04812
]
GCK72_016605
04147 Exosome [BR:
crq04147
]
GCK72_016605
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
GCK72_016605
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
GCK72_016605
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
GCK72_016605
NuA4 complex
GCK72_016605
Chromatin remodeling factors
BAF complex
GCK72_016605
PBAF complex
GCK72_016605
GBAF(ncBAF) complex
GCK72_016605
SWR1 complex
GCK72_016605
Mitochondrial biogenesis [BR:
crq03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
GCK72_016605
Cytoskeleton proteins [BR:
crq04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
GCK72_016605
Exosome [BR:
crq04147
]
Exosomal proteins
Proteins found in most exosomes
GCK72_016605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
9814644
NCBI-ProteinID:
XP_003100412
UniProt:
E3MTR9
LinkDB
All DBs
Position
V:complement(1130995..1132276)
Genome browser
AA seq
376 aa
AA seq
DB search
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgatgatgttgccgccctcgttgtagacaatggctccggtatgtgcaaagcc
ggtttcgccggagatgatgctccacgtgccgtgttcccctccatcgtcggacgaccacgt
catcaaggagtcatggtcggtatgggacagaaggactcgtacgtcggagatgaggcccag
tccaagagaggtatccttaccctcaagtacccaatcgagcacggaatcgtcacaaattgg
gacgatatggagaagatctggcaccacaccttctacaatgagctccgtgtggccccagaa
gagcacccagtcctcctcaccgaagctccattgaacccaaaggccaatcgtgaaaagatg
actcaaatcatgtttgagaccttcaacaccccagccatgtatgttgctatccaagctgtt
ctctccctctacgcttccggacgtaccaccggaatcgttctcgactccggagatggtgtc
acccacacggtcccaatctacgaaggatatgctctcccacacgccatcctccgtctcgac
ttggccggacgtgacctcactgattatctcatgaagattctcaccgagcgcggatactcc
ttcaccaccaccgctgaacgcgaaatcgttcgtgacatcaaggagaagctctgctacgtc
gccctcgacttcgagcaggagatggccaccgccgcttcttcatcttcactcgagaagtcc
tacgagcttccggacggacaggttatcaccgtcggaaatgaacgtttccgttgcccagag
gctctgttccagccatccttcttgggaatggagtctgccggaatccacgagacctcgtac
aactcgatcatgaagtgcgatattgacatccgtaaggacttgtacgccaacacagttctt
tctggaggaaccacaatgtacccaggaatcgcggatcgcatgcaaaaggagatcaccgct
cttgctccatcaacgatgaagatcaagatcatcgcaccaccagagcgcaagtactccgtc
tggatcggaggatcaatccttgcttccctctcaacattccaacagatgtggatctcaaag
caggagtacgacgagtccggaccatccatcgttcatcgcaaatgcttctaa
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