KEGG   Caenorhabditis remanei (nematode): GCK72_016980
Entry
GCK72_016980      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03420  Nucleotide excision repair
crq04120  Ubiquitin mediated proteolysis
crq04141  Protein processing in endoplasmic reticulum
crq04310  Wnt signaling pathway
crq04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    GCK72_016980
   04120 Ubiquitin mediated proteolysis
    GCK72_016980
  09124 Replication and repair
   03420 Nucleotide excision repair
    GCK72_016980
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    GCK72_016980
   04350 TGF-beta signaling pathway
    GCK72_016980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crq04121]
    GCK72_016980
   03400 DNA repair and recombination proteins [BR:crq03400]
    GCK72_016980
Enzymes [BR:crq01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     GCK72_016980
Ubiquitin system [BR:crq04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   GCK72_016980
  Multi subunit type E3
   SCF complex
    Ring finger protein
     GCK72_016980
   Cul2 complex
     GCK72_016980
   Cul3 complex
     GCK72_016980
   Cul4 complex
     GCK72_016980
   Cul7 complex
     GCK72_016980
   Cul8 complex
     GCK72_016980
   Cul9 complex
     GCK72_016980
DNA repair and recombination proteins [BR:crq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      GCK72_016980
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      GCK72_016980
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 9803218
NCBI-ProteinID: XP_003104436
UniProt: E3MHE1 A0A6A5G618
LinkDB
Position
V:<3010789..>3011097
AA seq 102 aa
MAQSSDSNAMEVEEATSQTVKKRFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQA
NQAAGLKEECTVAWGNCNHAFHFHCISRWLKTRQVCGEKRIS
NT seq 309 nt   +upstreamnt  +downstreamnt
atggcccagtcaagtgacagcaacgcaatggaagtcgaggaggcgactagccagacggtg
aagaagcgtttcgaagtcaagaaatggagtgccgtcgctctctgggcatgggacattcag
gtcgacaactgcgccatttgtcgcaatcacatcatggatttgtgcatcgagtgtcaggcg
aatcaggccgccggtctcaaggaggagtgcactgtcgcctgggggaactgcaatcacgcg
ttccactttcactgcatttcgcgttggctcaagactcgtcaggtttgtggtgaaaaacgg
atatcctga

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