Chromobacterium rhizoryzae: D1345_06770
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Entry
D1345_06770 CDS
T05688
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1345_06770 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crz03400
]
D1345_06770 (nth)
Enzymes [BR:
crz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D1345_06770 (nth)
DNA repair and recombination proteins [BR:
crz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D1345_06770 (nth)
Prokaryotic type
D1345_06770 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Ogg-HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AXT45897
UniProt:
A0AAD0W810
LinkDB
All DBs
Position
complement(1491459..1492106)
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AA seq
215 aa
AA seq
DB search
MNAVKRKEIFARLRDANPHPTTELEYSSPFELLISVLLSAQATDVSVNKATRRLYPVANT
PAAMLALGEESLADFIKTIGLYKTKARNVIATCRLLLEKHGGEVPQTREALEALPGVGRK
TANVVLNTAFGQPTIAVDTHIFRVSNRTRIAPGKDVREVEDKLVKYIPDEFKIDAHHWLI
LLGRYVCKARKPECERCVIADLCEYPAKTVMIKDN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccgtcaaacgcaaagaaatattcgcccgtctgcgcgacgccaacccgcacccc
accaccgaactggagtacagcagcccgttcgaactactgatctcggtgctgctgtcggcg
caagccaccgacgtcagcgtcaacaaggccacgcgccgcctctaccccgtggccaacacc
ccggcggccatgctggcgctgggagaagaatcgctggcggacttcatcaagaccataggc
ttgtacaagaccaaggccagaaacgtgatcgccacttgtcgtctgctgctggaaaagcat
ggcggcgaagtaccgcaaacccgcgaggccttggaggcgctgcccggcgtcggccgcaaa
acggccaacgtggtgctgaacactgctttcggccagcccaccatcgcggtggacactcat
attttcagggtatccaaccgcacccggatcgcgcccggcaaagacgtgcgagaagtcgag
gataagctggtaaaatacatccccgacgaattcaaaatcgacgcgcatcactggctgatc
ctgctcggacgctatgtctgcaaagccagaaagcctgaatgcgagcgctgcgtcatcgcc
gacctctgcgaatatccggcaaaaaccgttatgattaaagacaactga
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