Castanea sativa (European chestnut): 142605604
Help
Entry
142605604 CDS
T11266
Name
(RefSeq) transcription factor PCL1-like
KO
K28173
GARP family transcription factor, LUX subfamily
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142605604
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
142605604
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
142605604
NCBI-ProteinID:
XP_075633142
LinkDB
All DBs
Position
8:28276516..28279206
Genome browser
AA seq
318 aa
AA seq
DB search
MLMKMSEYVFGGGDEDRVTEWEVGLPGVDDLTPLSQLLIPAELASAFSISPEPYRTAVEV
NRASQTTFSTIRGVNHTTAKGSLFETTDPDPDPDQDPMVLEADENEITDRDGSGSDLKRS
RNKDDECCVEIEVEEADSALRNNENDDDESAAAADEARTVKRPRLVWTPQLHKRFVDVVG
HLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRQQGGSGGGGGGGGGLFSDGPS
STSTSTSDHLFASTTPHLPNYHMPTMMPQMLGHMGMPPMGGGGHHHHHHPYNMFQQQQQQ
PMNSNYQYGSHPVAPNEN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgaagatgagcgagtacgtattcgggggcggcgatgaggacagagtgacggag
tgggaggttgggctaccgggcgtcgacgatttgacgccgttatcgcagctgttgataccg
gcggagctggcttcggcgttcagtatttcgccggaaccctacaggaccgccgtggaagtc
aaccgcgcgtcgcaaacaacgttctcgactatccgtggggtcaaccacacgacggcgaag
gggtcgctgttcgaaacgacggatccggatcctgacccggaccaggacccgatggttctg
gaggcggacgagaacgagattaccgatcgagacgggtccgggtcggatctgaaaagatcg
agaaataaagacgacgagtgttgcgtggaaatagaagtggaagaagccgattcggcactc
cgtaacaacgagaacgacgacgacgagtcggcggcggcggcggacgaggcgaggacggta
aaacggccgcgtttggtttggaccccacagctacacaagcgattcgtggacgtggtgggc
cacctgggtatcaaaaacgcggttccgaaaacaatcatgcagctgatgaacgtcgaaggc
ttgactcgcgagaacgttgccagtcatctccagaagtatcgcctctacctcaagcgacag
caaggcggcagcggcggcggcggcggaggaggaggtgggttgttttccgatgggccgtcg
tcgacctccacttccacctccgatcatctcttcgcttccactactcctcacctgcctaat
taccacatgcctaccatgatgcctcaaatgctcggccacatgggtatgccacccatgggt
ggtggtggtcatcatcaccatcatcatccctacaatatgttccagcagcaacagcaacag
cctatgaacagtaattatcaatatgggtctcatcctgttgcgcctaatgagaattga
DBGET
integrated database retrieval system
