Castanea sativa (European chestnut): 142614477
Help
Entry
142614477 CDS
T11266
Name
(RefSeq) transcription factor PIF4-like
KO
K16189
phytochrome-interacting factor
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142614477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142614477
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
142614477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
142614477
NCBI-ProteinID:
XP_075643107
LinkDB
All DBs
Position
11:complement(27677604..27682531)
Genome browser
AA seq
539 aa
AA seq
DB search
MNNNWLPAGWSFESDLPVTKQKKSLGQDNDIVELLWRNGQVVLHSQTRKPSFNHNDSRQV
VQKPKLGGSGSYGNSSNLIQNDDDDDDDETVSWVQYPLEVDPFEKEFCYNLFSELPPSDP
KEIEQDKLLNKFGASDTDVDATHVIANSHQPTSISVSNSVVPEFPGNLVHHPPRFPFPES
AAQENHDSGGSGKVLNFRGSSNGQYGGEGSGQLMQGEVRECSVMTIGSSHCGSNQVPNDP
DFSNGVGTSALFAGPVKQDVHKITPQSERRKMDTLEPTVASSSGGSGGSFGRRCTQSTGV
NSMKRKVRDSEESECQSEAAELESVAGNKPAQRSTSSRRSRSAEVHNLSERRRRDRINEK
MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQLMWMGSGMAPMMFPGVQRYISLMGM
GIGPPPMPSIHNPMHLRRVPPVDQSMSMVPPTNHALMCQTPVFNNVNYQNQMHNPSFSEK
YARYMGFHHMQTVSQPLHMLRFGSPTIQQSQTRGPPGTSSGRLNGGATINDTATGMNDG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaataataattggcttccagctggttggagttttgagagtgatcttcctgtgaccaaa
caaaagaaatccttggggcaagacaatgacatagtagagctgttatggagaaatggtcag
gtagttttgcacagtcaaacgcgaaaaccaagtttcaatcataatgattcaagacaagta
gttcagaaaccaaagttaggaggcagtggctcatatgggaattcaagcaatttaattcaa
aatgatgatgatgatgatgatgatgagactgtgtcatgggtacaatatcctcttgaagtt
gatcccttcgaaaaagagttctgttacaaccttttttctgaattgccaccatctgatcct
aaagaaattgaacaagacaagcttcttaataagtttggtgcttctgatactgatgttgat
gctactcatgtcattgcaaactcacatcaaccaactagtattagtgttagtaattctgtt
gtacctgaattccccggcaacttggtgcatcatcctcctagatttccttttcctgaatca
gcagcccaggaaaatcatgattcaggaggttcaggaaaagtcttgaattttagaggatct
tcaaatgggcaatacggaggggaaggatcaggtcaattgatgcaaggagaggttagagag
tgttcagtaatgacgattggatccagccactgtggcagcaatcaagtaccaaatgaccct
gattttagcaatggtgttgggacttctgctttatttgctggacctgtaaaacaagatgtt
cacaagataacgcctcagagtgagagacgaaaaatggacacactcgagcctactgttgct
tcttcgtctggtggctcaggtggtagttttggaagaagatgcacacaatctactggtgtc
aatagcatgaagagaaaggtcagggattctgaggaatcagagtgccaaagtgaggccgcg
gaacttgaatcagtggctggaaacaagccagcgcaacgatcaacatcctcccgcaggagc
cgctctgctgaagttcataacctttcagaaaggagacggagagatcggatcaatgagaaa
atgaaggcattgcaagagctcataccacactgtaacaagactgataaagcatcaatgcta
gatgaggcaattgaatacttgaagtcacttcagttacaacttcagttaatgtggatggga
agtgggatggctccaatgatgtttccaggcgtccagcgctatatctctctaatgggtatg
ggaattggtcctcctcctatgccttctattcacaatccaatgcatttacgaagggtcccg
ccagttgatcaatccatgtccatggttccaccgacaaaccatgctctaatgtgccaaact
ccagtttttaataatgttaattatcaaaatcagatgcataatccttctttttctgagaaa
tatgcacgttacatgggattccatcatatgcaaaccgtgtctcagcccttgcatatgttg
agatttggttccccaacaattcaacagagtcaaacaaggggaccgcctgggactagcagt
ggacgcttaaatggaggagctacaattaatgatactgcaactggcatgaatgatggttaa
DBGET
integrated database retrieval system