Castanea sativa (European chestnut): 142619902
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Entry
142619902 CDS
T11266
Name
(RefSeq) transcription factor PIF1
KO
K16189
phytochrome-interacting factor
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142619902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142619902
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
142619902
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
142619902
NCBI-ProteinID:
XP_075649377
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Position
12:41576116..41587201
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AA seq
520 aa
AA seq
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MINHHCVPDFEMDEDYSFPTSSSAVSRSRKSPLPEEEIMELLWQNGQVVMQSQNQRSIRR
SPPPKLEQENDNNNNNNNHLFMQEDEMAAWLHYPLDEDNFCAQLELLDNNNNMNMSSQSQ
TTTQTNINPMVRSSQPQPQPPPLRPPIPPSRRSELAESKMSQFPSRQKGYYDEETNKRMA
AAVRESSTMVDSNETPETWAVVDKGCATMSVGGAEVAVTSSGGGGGGGGGDRSKVEMMTC
EMTVTSSPGCSSASAEADQKEEAAAGEDRKRKSIEADDADAADECHSEDVEFESADAKKR
VRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSL
QLQVQMMSMGCGMVPMMFPGVQQYMPTMGMGIGMGMGMGMEMGINRPMFPFPNMLAGSGL
PTGAAAHLGPRFPMPAFMPPVPVPDPSKIQSNQSEQMLNSLGAQHPSQSWFPNFTDPYQQ
YVAPHQMQLPLPRNQAMAQPSTSKPSSSRGPENLDNNQSG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgattaatcatcactgcgttccagattttgaaatggacgaagattactcattccctacc
tcatcttctgctgtttctcgctccagaaaatcacctttgccagaagaggagatcatggag
ctgttgtggcaaaacgggcaagtggttatgcagagtcaaaaccaaagatctataagaaga
tctccaccgccgaaattggaacaagagaacgacaacaacaacaacaacaacaaccatcta
tttatgcaagaagatgaaatggcagcttggcttcactaccctctggatgaggacaatttc
tgtgcacaacttgaacttcttgacaacaacaacaacatgaacatgagtagtcagagtcag
actactactcagaccaatattaaccctatggttcggtcaagccagccgcagccgcagccg
ccgccgttgaggccaccgattccgccttcgaggaggagtgagttggcggagtcgaagatg
agtcagttcccgtcgagacaaaagggttattatgatgaagaaactaacaagagaatggcg
gcggcggtgagggaatcgagtacgatggtggattcgaacgagactcccgagacttgggct
gtggtggataagggttgcgctaccatgagcgtaggtggcgctgaggtggcagttacatct
tccggtggcggcggtggtggtggtggtggtgataggagcaaggtggagatgatgacttgt
gagatgacggtgacttcatcgccggggtgttcgagtgcaagtgcggaggcggatcagaag
gaagaggcggcggcaggtgaagatcggaagcggaaatcaatagaagccgacgacgccgac
gccgccgacgagtgccacagcgaggatgttgagtttgaatctgccgatgcaaagaaacgg
gttcgtggatcaacctctacaaagagatcccgtgctgcagaggtccacaatctttcggag
aggagacgtcgagataggataaatgagaagatgaaggctttgcaggaactcatacctcgt
tgcaacaagtcagacaaagcttcaatgctggatgaggcaattgagtacttgaagtcactt
cagttgcaagtacagatgatgtccatgggatgtggcatggtccctatgatgtttcctggt
gtccagcagtatatgccaacaatgggtatgggaattgggatgggcatgggcatgggcatg
gaaatgggcatcaaccggcctatgtttccatttcccaatatgttagctggttcagggttg
ccaacaggagcagcagctcatctgggaccaagattcccaatgccagctttcatgccgcct
gttcctgtgcccgatccttccaaaatccaatcaaaccagtcagaacaaatgctgaactca
cttggggcacaacatccaagccagtcatggttcccaaattttaccgatccttatcagcag
tatgttgctccccaccaaatgcagttaccgctaccacggaatcaagcaatggcccagcca
agtactagcaagccaagctccagtagaggacctgaaaatcttgacaataaccaatcaggt
tga
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