KEGG   Castanea sativa (European chestnut): 142620349
Entry
142620349         CDS       T11266                                 
Name
(RefSeq) uncharacterized protein LOC142620349 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142620349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csaa03041]
    142620349
Spliceosome [BR:csaa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    142620349
 Complex B
    142620349
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    142620349
SSDB
Motif
Pfam: SMN_Tudor Agenet CENP-C_mid TUDOR DUF4537 CHASE3
Other DBs
NCBI-GeneID: 142620349
NCBI-ProteinID: XP_075649849
LinkDB
Position
1:90754392..90761480
AA seq 296 aa
MQGEEVSIEELASNLATYKDQLHQVRELLVDDPGNSEYVDMERELKEVIALTEELLATAK
QNDISGSDIGTSGRASPSLPHSKMDSESMLDHQGKFPIGTKVQAVWSEDGEWYEATIEAY
SPNGYFVSYDGWGNKEEVDPDNVRPIQEGVVNTLAEAERVAEATKQAIKRKIALAASMDF
QSRSLPAKLRIEPDDPEDVKVAKRKKIHAFKSKVRMEQLEVTQNKRQNAWQQFQTTKGKT
KKIGFFSGRKRESIFKSPEDPQGKVGVTGSGKGLTEFQKREKHLHLKGATVDGADE
NT seq 891 nt   +upstreamnt  +downstreamnt
atgcaaggagaagaggtaagtatagaagagctagcctcaaatcttgccacctacaaagat
cagcttcatcaggtcagagagcttttggttgatgatcctggaaactctgaatatgtagac
atggaaagggagcttaaagaggtgattgctttgacggaagaacttcttgcaactgcaaag
caaaatgatatttcaggatcagatattgggactagtggtagggcatctccaagtttgcct
cattccaaaatggactcagaaagcatgttggatcatcaaggaaagtttcccattggcaca
aaagttcaagctgtttggagtgaagatggggaatggtatgaagcaacaattgaggcgtat
tctccaaatggctatttcgttagttatgatggatgggggaataaagaagaggtggatcct
gacaatgtaaggccaattcaagaaggagttgtcaatactttggcagaagctgagagagtg
gctgaagctaccaagcaagctataaaacggaagattgcactggctgcttccatggatttc
cagtcgcggagtttacccgcaaagcttcgaatagagcctgatgacccagaggatgtgaaa
gtcgccaagcgtaagaagatacatgcttttaagtcaaaggtgcggatggagcaacttgaa
gtcacacagaataagcggcagaatgcttggcagcagttccagacaaccaaaggcaagact
aagaagattggtttcttttcgggtcgcaagcgggaaagcatcttcaagtctccagaagac
ccacaaggcaaggttggtgtgacaggaagtggaaagggtttgaccgagttccaaaaaagg
gaaaaacacttgcatctcaagggagcgactgttgatggtgctgatgaatag

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