KEGG   Castanea sativa (European chestnut): 142628639
Entry
142628639         CDS       T11266                                 
Name
(RefSeq) uncharacterized protein LOC142628639
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03420  Nucleotide excision repair
csaa04120  Ubiquitin mediated proteolysis
csaa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    142628639
   04120 Ubiquitin mediated proteolysis
    142628639
  09124 Replication and repair
   03420 Nucleotide excision repair
    142628639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csaa04121]
    142628639
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142628639
Enzymes [BR:csaa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     142628639
Ubiquitin system [BR:csaa04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   142628639
  Multi subunit type E3
   SCF complex
    Ring finger protein
     142628639
   Cul2 complex
     142628639
   Cul3 complex
     142628639
   Cul4 complex
     142628639
   Cul7 complex
     142628639
   Cul8 complex
     142628639
   Cul9 complex
     142628639
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      142628639
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      142628639
SSDB
Motif
Pfam: zf-rbx1
Other DBs
NCBI-GeneID: 142628639
NCBI-ProteinID: XP_075658806
LinkDB
Position
3:20000586..20005426
AA seq 165 aa
MHPTCTIPKRRFQSKSTWKALVSYSLAITVAIFHYFSPPSSFPIPSSFRKNNKRFEIKEW
NAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWATHLNLIQPHEVSHQ
LLEPCGKSSGIVMELDYKKGCNREEHALSEIKPCLNNIFDAKQVL
NT seq 498 nt   +upstreamnt  +downstreamnt
atgcatccaacatgcaccatcccaaagagaagatttcagtccaagtcaacatggaaagct
ctggtttcctattccttagcaattactgtagctatttttcactacttctctccgccctcc
tcattccccatcccctcttcttttaggaaaaacaacaaacgcttcgaaatcaaagagtgg
aacgccgtttctctctgggcttgggatattgtggtggataactgtgccatctgtaggaac
cacatcatggatctctgcattgagtgccaggcgaatcaggctagtgctactagcgaggaa
tgcactgttgcttgggccacacatttgaatctcattcaaccacacgaagtttctcatcaa
ttgcttgagccctgtgggaaaagctcaggaatagtgatggagctggactataaaaaggga
tgtaatagagaggaacatgcattgagtgaaattaagccgtgtttgaacaatatatttgat
gcaaaacaggttctttga

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