Castanea sativa (European chestnut): 142631927
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Entry
142631927 CDS
T11266
Name
(RefSeq) transcription factor PIF7
KO
K16189
phytochrome-interacting factor
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142631927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142631927
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
142631927
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
POX
Cut8
Rit1_C
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
142631927
NCBI-ProteinID:
XP_075662406
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Position
4:35778598..35783302
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AA seq
436 aa
AA seq
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MSQYIVPNWNLKHQRQEQVEGEEGNRSSHVHNQQQNHPSSTSPLVPNMSDYEVAELTWEN
GQLSMHGLRGLIPTTPTKPTWGRAGDTLESIVHQATCHKQISNVLQHDHAPAANVVPIDA
VSTDGTWAETESTGQVQVAPTTLMRKRTRSESEQCHGRKICGSLNEDSADHGASATFCRD
NDTTIMTWASFDSPRSLKTRTTEVDSSCLDGLGNRDEEHETNNEMGRSHSTRKTRAAAIH
NQSERRRRDRINQKMKTLQRMVPNANKTDIASMLDEVIEYLKQLQAQVHQLMSMRSMPQM
MMPLGMQQHLQMSLLARMGMGMGVGLGMGMGMLDMSTMSHSAPQTLASLINPASVSASAP
TLVSPPFVLTSMIPTDASAQPKPNSGTNAAVPLLAQSMNIDLYNKMAAVYQQQVNQTTVT
TQSNSCPSQSHHVQSG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtatatagtaccaaactggaacctaaagcaccaaagacaagaacaagtcgaa
ggagaagagggaaacagatcttctcacgtgcacaaccagcagcagaaccaccccagtagt
acttctcctcttgtccccaatatgtctgactatgaagttgcagagctaacatgggaaaat
ggtcagctatccatgcatgggcttcgtgggctcattcccacaacaccaacaaagcccaca
tggggaagggctggtgatacgctagaatcaatagtccaccaagctacatgccacaagcaa
atctcaaatgtactccaacatgaccatgccccggcagccaatgtagtccctattgatgct
gtttccactgatgggacatgggctgagactgagagtaccggtcaggtacaggtggcaccg
acgacgctgatgaggaagaggacacgttcggaatcagagcaatgtcatggaagaaaaatt
tgtggtagtttgaatgaagatagtgctgatcatggtgcaagtgcaacgttttgtagggac
aatgatacaaccataatgacatgggcttcatttgactctccacggagcttgaagaccaga
accactgaagtggactcgtcttgtctcgatggattgggaaacagagatgaagagcatgag
accaataatgaaatgggccgctcccactcaacaagaaaaactagagcagctgctatccat
aatcagtctgaaaggagaagaagagataggatcaatcagaagatgaaaaccctgcagagg
atggtgccaaatgcaaataagacagatatagcttcaatgcttgatgaagtgattgagtac
ttaaaacaacttcaagcacaagttcatcaactgatgagtatgagaagtatgccccagatg
atgatgcctttaggcatgcagcaacatcttcaaatgtctctactagcacgtatgggcatg
ggcatgggcgttgggctagggatgggtatgggtatgcttgacatgagtaccatgtcacac
agtgcacctcaaactcttgcttcacttatcaatccagcttcagtttctgcttcagctcct
acactagtttcacctccatttgtgctgacctccatgattccaactgatgcttcagctcag
ccgaagcctaattccggaaccaatgccgcagttccattactagcacaatcaatgaatata
gacctctacaataagatggctgcagtctatcagcaacaagtcaatcagaccacagtcact
acacagtcaaatagttgcccatcacagtcacaccatgttcaaagtggctga
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