KEGG   Castanea sativa (European chestnut): 142636697
Entry
142636697         CDS       T11266                                 
Name
(RefSeq) uncharacterized protein LOC142636697
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03420  Nucleotide excision repair
csaa04120  Ubiquitin mediated proteolysis
csaa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    142636697
   04120 Ubiquitin mediated proteolysis
    142636697
  09124 Replication and repair
   03420 Nucleotide excision repair
    142636697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csaa04121]
    142636697
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142636697
Enzymes [BR:csaa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     142636697
Ubiquitin system [BR:csaa04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   142636697
  Multi subunit type E3
   SCF complex
    Ring finger protein
     142636697
   Cul2 complex
     142636697
   Cul3 complex
     142636697
   Cul4 complex
     142636697
   Cul7 complex
     142636697
   Cul8 complex
     142636697
   Cul9 complex
     142636697
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      142636697
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      142636697
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 142636697
NCBI-ProteinID: XP_075667099
LinkDB
Position
5:complement(3106282..3109549)
AA seq 171 aa
MHTTPQYQEFSLSHFTWENRTPHLLLSLSLSHSEKAMETDAADTDVTMVPANPEPEAEAA
PASSSSALLAAASSSSSFRKNNKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQ
ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 516 nt   +upstreamnt  +downstreamnt
atgcacactactcctcagtaccaagaattttctctctcccactttacctgggaaaaccga
accccacaccttcttctctctctctctctgtctcacagcgaaaaagcaatggaaacagac
gcagcagacacagacgtgaccatggttccagccaaccccgaacccgaggccgaggccgca
cccgcctcctcaagctcagcccttctggctgctgcttcctcttcctcttcttttaggaaa
aacaacaaacgcttcgaaatcaaaaagtggaacgccgtttctctctgggcttgggatatt
gtggtggataactgtgccatctgtaggaaccacatcatggatctctgcattgagtgccag
gcgaatcaggctagtgctactagcgaggaatgcactgttgcttggggtgtttgcaaccat
gccttccacttccactgcatcagtcgatggttgaaaactcgccaagtttgcccattggac
aatagcgagtgggagttccaaaagtatggtcactag

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