KEGG   Chlorocebus sabaeus (green monkey): 103239283
Entry
103239283         CDS       T04361                                 
Symbol
KDM2B
Name
(RefSeq) lysine demethylase 2B
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103239283 (KDM2B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:csab03000]
    103239283 (KDM2B)
   04121 Ubiquitin system [BR:csab04121]
    103239283 (KDM2B)
   03036 Chromosome and associated proteins [BR:csab03036]
    103239283 (KDM2B)
Enzymes [BR:csab01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     103239283 (KDM2B)
Transcription factors [BR:csab03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    103239283 (KDM2B)
Ubiquitin system [BR:csab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     103239283 (KDM2B)
Chromosome and associated proteins [BR:csab03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103239283 (KDM2B)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     103239283 (KDM2B)
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box Cupin_8 JmjC AppA_SCHIC
Other DBs
NCBI-GeneID: 103239283
NCBI-ProteinID: XP_008003178
Ensembl: ENSCSAG00000002201
LinkDB
Position
11:complement(116805541..116957236)
AA seq 1378 aa
MSLQWLPKTPGGVPRVERSWTPGVRAPLLVLLFSIFGNCAKLLRLQWWGAGGARLLHLLV
LAQVERRPPAPPVMSRALWFGSSQRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQL
YQGDFVHAMEGKDFNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLV
DVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDW
VDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGG
KIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYT
PVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRS
HLTQEYQRESMLIDAPRKPSIDGFSSDSWLEMEEEACDQQPQEEEEKDEEGEGRDRAPKP
PTDGSASPTSMPSEDQEALGKKPKAPALRFLKRTLSNESEESVKSTTLPVDYPKTPTGSP
ATEVSAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADD
DPSLAITGVPVVTWPKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEA
CLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEE
GKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQKRGPGFK
YASNLPGSLLKEQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPPDGLLRRKSDDV
HLRKKRKYEKPQELSGRKRASSLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKP
GKEDKLFRKKRRSWKNAEDRMALANKPLRRFKQEPEDDLPEAPPKTRESDHSRSSSPTAG
PSTEGTEGPEEKKKVKMRRKRRLPNKELSRELSKELNHEIQRTESSLANENQQPIKSEPE
SEGEEPKRPPGVCERPHRFSKGLNGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKCIQM
ERHVIRPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCD
KRLWTRIDLNHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSG
CSWIAVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVEL
RLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDC
NKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq 4137 nt   +upstreamnt  +downstreamnt
atgtcccttcaatggcttccaaagacaccggggggagtaccccgtgtggagcgcagctgg
acccccggggtgcgggcccctctccttgtcctgcttttcagcatctttggcaattgcgca
aagttgcttaggttgcaatggtggggtgcagggggcgcgcggctgctgcacctgttagtg
ctggcccaggttgagaggcgacctccagcccccccagtaatgtcccgggctctctggttt
gggtcctcgcagcgcccgattgaccgccagcgatacgacgagaacgaagacttgtcggac
gtggaggagatcgtcagcgtccgcggcttcagcctggaggagaagcttcgcagccagctg
taccagggggacttcgtgcacgccatggagggcaaagatttcaactatgagtacgtacag
agagaagctctcagggttcccctgatatttcgagaaaaggatggactgggaattaagatg
cctgaccctgatttcacagtccgagacgtcaaactcctagtggggagtcggcggcttgtg
gacgtgatggatgtgaacacccagaagggcacagagatgagcatgtcccagtttgtgcgt
tactacgagacgcctgaggcccagcgggacaagctgtacaacgtcatcagcctagagttc
agccacaccaagctggagcacttggtcaagcgtccgactgtggtagacctggtggactgg
gtggacaacatgtggccccagcatctgaaggagaagcagacagaagccacgaatgccatt
gcagagatgaagtatccgaaagtgaagaagtactgtctgatgagcgtgaaaggttgtttc
accgacttccacatcgactttggaggcacttccgtttggtaccatgttttccggggtggg
aagattttttggctgattcctccaacgctgcacaatttggcgctgtacgaggagtgggtg
ctgtcaggcaaacagagtgacatctttctgggagaccgtgtggaacgatgccaaagaatt
gagctgaagcagggctacacatttttcatcccttccggttggatccatgccgtctacacc
cctgtagactctttggtattcggcggaaacatcctgcacagctttaacgtgcccatgcag
ctgcggatctacgagatcgaggacaggacgcgggtgcagcccaaattccgttaccctttc
tactatgagatgtgctggtatgtcctggagagatacgtgtactgtgtgacccagcgctcc
cacctcactcaggaataccagagggagtcgatgcttattgatgccccgaggaagcccagc
atagacggcttctcttcagattcctggctggagatggaggaggaggcctgtgatcagcag
cctcaggaggaggaggagaaggacgaggagggcgagggcagggacagggcacccaaaccg
cccaccgatggctccgcttcacccaccagcatgccctccgaggaccaggaggccctcggg
aagaagcccaaagcacctgccctgcgattcctcaaaaggactttgtctaacgagtcagag
gagagcgtgaagtctaccacattgcccgtagactaccccaagacccccactggctctccc
gccacggaggtctctgctaaatggacccatctcaccgagtttgaactgaagggcctgaaa
gctctggtggagaaactggaatccctcccggagaacaagaagtgtgtccctgagggcatc
gaggacccccaggcactcctggagggtgtgaagaacgtcctgaaggagcacgcggacgat
gaccctagtctggccatcactggggtccctgtggtgacttggccaaagaagactccaaag
aaccgggctgtgggtcggcccaaggggaagctgggcccggcctccgcggtgaagttggcc
gccaaccggacaacggcaggagctcggcggcgccggacgcgatgccgcaagtgcgaggcc
tgcctgcggaccgagtgcggagagtgccacttctgcaaggacatgaagaagttcgggggc
cccgggcgcatgaagcagagctgcatcatgcggcagtgcatcgcgccagtgctcccccac
accgccgtgtgccttgtgtgtggcgaggcggggaaggaagacacagtggaagaggaggaa
ggcaagtttaacctcatgctcatggagtgctccatctgcaacgaaatcatccaccccgga
tgccttaagattaaggagtcagagggtgtggtcaacgacgagcttccaaactgctgggag
tgtccgaagtgtaaccacgccggcaagaccgggaaacaaaagcgtggccctggctttaag
tacgcctccaacctgcccggctccctgctcaaggagcagaagatgaaccgggacaacaag
gaagggcaggaacctgccaagcggaggagcgaatgtgaggaggcgccccggcgcaggtcg
gacgagcaccccaagaaggtgccgccggacggcctcctgcgcagaaagtctgatgacgtg
cacctgaggaagaagcggaaatacgagaagccccaggagctgagtggacgcaagcgggcc
tcatcgcttcaaacgtcccccggttcctcctctcacctctcgccgaggccccctctaggc
agcagcctcagcccctggtggagatccagtctcacttacttccagcagcagctcaaacct
ggcaaagaagataagcttttcaggaaaaagcgtcggtcctggaagaacgccgaggaccgc
atggcgctggccaacaagcccctccggcgcttcaagcaggaacccgaggacgatctgccc
gaggcacccccaaagaccagggagagcgaccactcccgctccagctcccccaccgcagga
cccagcaccgaggggaccgagggcccggaggagaagaagaaggtgaagatgcgccggaag
cggcggcttcccaacaaggagctgagcagggagctgagcaaggagctcaaccacgagatc
cagaggacggagagcagcctggccaacgagaaccagcagcccatcaagtcggagcctgag
agcgagggcgaggagcccaagcggcccccaggcgtctgcgagcgtccccaccgcttcagc
aaggggctcaacggcacccctcgggagctgcggcaccagctgggacccggcctgcgcagc
ccgccccgtgtcatctcccggcccccaccctccgtgtccccgcccaagtgtatccagatg
gagcgccatgtgatccggccaccccccatcagccccccgcctgactcgctacccctggac
gatggggcagcccacgtcatgcacagggaggtgtggatggccgtcttcagctacctcagc
caccaagacctgtgcgtctgcatgcgggtctgcaggacctggaaccgctggtgctgcgat
aagcggttgtggacccgcattgacctgaaccactgcaagtctatcacacccctgatgctg
agtggcatcatccggcgacagcctgtctccctcgacctcagctggaccaatatctccaag
aagcagctgagctggctcatcaaccggctgcctgggctccgggacttggtgctgtcaggc
tgctcatggatcgcggtctcggccctttgcagctccagttgtccgctgctccggactctg
gatgtccagtgggtggagggactaaaggatgcccagatgcgggatctcctgtccccgccc
acagacaacaggccaggtcagatggacaatcggagcaagctccgaaacatcgtggagctg
cgcctggcaggcctggacatcacagatgcctccctgcggctcatcatccgtcacatgccc
ctgctctccaagctccacctcagttactgtaaccacgtcaccgaccagtccatcaacctg
ctcaccgctgttggcaccaccacccgagactccttaactgagatcaacctgtctgactgc
aataaggtcactgatcagtgcctgtccttcttcaaacgctgtggaaacatctgtcacatt
gacctgaggtactgcaagcaagtcaccaaggaaggctgtgagcagttcatagccgagatg
tctgtgagtgtccagtttgggcaagtagaagaaaaactcctgcaaaaactgagttag

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