Chlorocebus sabaeus (green monkey): 103239283
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Entry
103239283 CDS
T04361
Symbol
KDM2B
Name
(RefSeq) lysine demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103239283 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csab03000
]
103239283 (KDM2B)
04121 Ubiquitin system [BR:
csab04121
]
103239283 (KDM2B)
03036 Chromosome and associated proteins [BR:
csab03036
]
103239283 (KDM2B)
Enzymes [BR:
csab01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
103239283 (KDM2B)
Transcription factors [BR:
csab03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103239283 (KDM2B)
Ubiquitin system [BR:
csab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103239283 (KDM2B)
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103239283 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
103239283 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
103239283
NCBI-ProteinID:
XP_008003178
Ensembl:
ENSCSAG00000002201
LinkDB
All DBs
Position
11:complement(116805541..116957236)
Genome browser
AA seq
1378 aa
AA seq
DB search
MSLQWLPKTPGGVPRVERSWTPGVRAPLLVLLFSIFGNCAKLLRLQWWGAGGARLLHLLV
LAQVERRPPAPPVMSRALWFGSSQRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQL
YQGDFVHAMEGKDFNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLV
DVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDW
VDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGG
KIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYT
PVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRS
HLTQEYQRESMLIDAPRKPSIDGFSSDSWLEMEEEACDQQPQEEEEKDEEGEGRDRAPKP
PTDGSASPTSMPSEDQEALGKKPKAPALRFLKRTLSNESEESVKSTTLPVDYPKTPTGSP
ATEVSAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADD
DPSLAITGVPVVTWPKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEA
CLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEE
GKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQKRGPGFK
YASNLPGSLLKEQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPPDGLLRRKSDDV
HLRKKRKYEKPQELSGRKRASSLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKP
GKEDKLFRKKRRSWKNAEDRMALANKPLRRFKQEPEDDLPEAPPKTRESDHSRSSSPTAG
PSTEGTEGPEEKKKVKMRRKRRLPNKELSRELSKELNHEIQRTESSLANENQQPIKSEPE
SEGEEPKRPPGVCERPHRFSKGLNGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKCIQM
ERHVIRPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCD
KRLWTRIDLNHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSG
CSWIAVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVEL
RLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDC
NKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcaatggcttccaaagacaccggggggagtaccccgtgtggagcgcagctgg
acccccggggtgcgggcccctctccttgtcctgcttttcagcatctttggcaattgcgca
aagttgcttaggttgcaatggtggggtgcagggggcgcgcggctgctgcacctgttagtg
ctggcccaggttgagaggcgacctccagcccccccagtaatgtcccgggctctctggttt
gggtcctcgcagcgcccgattgaccgccagcgatacgacgagaacgaagacttgtcggac
gtggaggagatcgtcagcgtccgcggcttcagcctggaggagaagcttcgcagccagctg
taccagggggacttcgtgcacgccatggagggcaaagatttcaactatgagtacgtacag
agagaagctctcagggttcccctgatatttcgagaaaaggatggactgggaattaagatg
cctgaccctgatttcacagtccgagacgtcaaactcctagtggggagtcggcggcttgtg
gacgtgatggatgtgaacacccagaagggcacagagatgagcatgtcccagtttgtgcgt
tactacgagacgcctgaggcccagcgggacaagctgtacaacgtcatcagcctagagttc
agccacaccaagctggagcacttggtcaagcgtccgactgtggtagacctggtggactgg
gtggacaacatgtggccccagcatctgaaggagaagcagacagaagccacgaatgccatt
gcagagatgaagtatccgaaagtgaagaagtactgtctgatgagcgtgaaaggttgtttc
accgacttccacatcgactttggaggcacttccgtttggtaccatgttttccggggtggg
aagattttttggctgattcctccaacgctgcacaatttggcgctgtacgaggagtgggtg
ctgtcaggcaaacagagtgacatctttctgggagaccgtgtggaacgatgccaaagaatt
gagctgaagcagggctacacatttttcatcccttccggttggatccatgccgtctacacc
cctgtagactctttggtattcggcggaaacatcctgcacagctttaacgtgcccatgcag
ctgcggatctacgagatcgaggacaggacgcgggtgcagcccaaattccgttaccctttc
tactatgagatgtgctggtatgtcctggagagatacgtgtactgtgtgacccagcgctcc
cacctcactcaggaataccagagggagtcgatgcttattgatgccccgaggaagcccagc
atagacggcttctcttcagattcctggctggagatggaggaggaggcctgtgatcagcag
cctcaggaggaggaggagaaggacgaggagggcgagggcagggacagggcacccaaaccg
cccaccgatggctccgcttcacccaccagcatgccctccgaggaccaggaggccctcggg
aagaagcccaaagcacctgccctgcgattcctcaaaaggactttgtctaacgagtcagag
gagagcgtgaagtctaccacattgcccgtagactaccccaagacccccactggctctccc
gccacggaggtctctgctaaatggacccatctcaccgagtttgaactgaagggcctgaaa
gctctggtggagaaactggaatccctcccggagaacaagaagtgtgtccctgagggcatc
gaggacccccaggcactcctggagggtgtgaagaacgtcctgaaggagcacgcggacgat
gaccctagtctggccatcactggggtccctgtggtgacttggccaaagaagactccaaag
aaccgggctgtgggtcggcccaaggggaagctgggcccggcctccgcggtgaagttggcc
gccaaccggacaacggcaggagctcggcggcgccggacgcgatgccgcaagtgcgaggcc
tgcctgcggaccgagtgcggagagtgccacttctgcaaggacatgaagaagttcgggggc
cccgggcgcatgaagcagagctgcatcatgcggcagtgcatcgcgccagtgctcccccac
accgccgtgtgccttgtgtgtggcgaggcggggaaggaagacacagtggaagaggaggaa
ggcaagtttaacctcatgctcatggagtgctccatctgcaacgaaatcatccaccccgga
tgccttaagattaaggagtcagagggtgtggtcaacgacgagcttccaaactgctgggag
tgtccgaagtgtaaccacgccggcaagaccgggaaacaaaagcgtggccctggctttaag
tacgcctccaacctgcccggctccctgctcaaggagcagaagatgaaccgggacaacaag
gaagggcaggaacctgccaagcggaggagcgaatgtgaggaggcgccccggcgcaggtcg
gacgagcaccccaagaaggtgccgccggacggcctcctgcgcagaaagtctgatgacgtg
cacctgaggaagaagcggaaatacgagaagccccaggagctgagtggacgcaagcgggcc
tcatcgcttcaaacgtcccccggttcctcctctcacctctcgccgaggccccctctaggc
agcagcctcagcccctggtggagatccagtctcacttacttccagcagcagctcaaacct
ggcaaagaagataagcttttcaggaaaaagcgtcggtcctggaagaacgccgaggaccgc
atggcgctggccaacaagcccctccggcgcttcaagcaggaacccgaggacgatctgccc
gaggcacccccaaagaccagggagagcgaccactcccgctccagctcccccaccgcagga
cccagcaccgaggggaccgagggcccggaggagaagaagaaggtgaagatgcgccggaag
cggcggcttcccaacaaggagctgagcagggagctgagcaaggagctcaaccacgagatc
cagaggacggagagcagcctggccaacgagaaccagcagcccatcaagtcggagcctgag
agcgagggcgaggagcccaagcggcccccaggcgtctgcgagcgtccccaccgcttcagc
aaggggctcaacggcacccctcgggagctgcggcaccagctgggacccggcctgcgcagc
ccgccccgtgtcatctcccggcccccaccctccgtgtccccgcccaagtgtatccagatg
gagcgccatgtgatccggccaccccccatcagccccccgcctgactcgctacccctggac
gatggggcagcccacgtcatgcacagggaggtgtggatggccgtcttcagctacctcagc
caccaagacctgtgcgtctgcatgcgggtctgcaggacctggaaccgctggtgctgcgat
aagcggttgtggacccgcattgacctgaaccactgcaagtctatcacacccctgatgctg
agtggcatcatccggcgacagcctgtctccctcgacctcagctggaccaatatctccaag
aagcagctgagctggctcatcaaccggctgcctgggctccgggacttggtgctgtcaggc
tgctcatggatcgcggtctcggccctttgcagctccagttgtccgctgctccggactctg
gatgtccagtgggtggagggactaaaggatgcccagatgcgggatctcctgtccccgccc
acagacaacaggccaggtcagatggacaatcggagcaagctccgaaacatcgtggagctg
cgcctggcaggcctggacatcacagatgcctccctgcggctcatcatccgtcacatgccc
ctgctctccaagctccacctcagttactgtaaccacgtcaccgaccagtccatcaacctg
ctcaccgctgttggcaccaccacccgagactccttaactgagatcaacctgtctgactgc
aataaggtcactgatcagtgcctgtccttcttcaaacgctgtggaaacatctgtcacatt
gacctgaggtactgcaagcaagtcaccaaggaaggctgtgagcagttcatagccgagatg
tctgtgagtgtccagtttgggcaagtagaagaaaaactcctgcaaaaactgagttag
DBGET
integrated database retrieval system