Chlorocebus sabaeus (green monkey): 103242490
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Entry
103242490 CDS
T04361
Symbol
SMCR8
Name
(RefSeq) Smith-Magenis syndrome chromosome region, candidate 8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab04140
Autophagy - animal
csab05014
Amyotrophic lateral sclerosis
csab05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103242490 (SMCR8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103242490 (SMCR8)
05022 Pathways of neurodegeneration - multiple diseases
103242490 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csab04131
]
103242490 (SMCR8)
Membrane trafficking [BR:
csab04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
103242490 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
103242490
NCBI-ProteinID:
XP_008008771
Ensembl:
ENSCSAG00000008046
UniProt:
A0A0D9R6R7
LinkDB
All DBs
Position
16:17358952..17367323
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AA seq
936 aa
AA seq
DB search
MISAPDVVAFTKEEEYEEEPYNEPALPEEYSVPLFPFANQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSRAS
ECLKTGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPHRKLKGCDLCPGEMEHIQDQASQASTTSNPDESADTDLYTCRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLTQLSHIEHMFRGDLCYLLTSQIDRA
LLKQQHITNFLFEDFVEVDDRMVEKQESIPSKPSQDRLPSRSLEECPIPKVLISVGSYKS
SVESVLIKMEQELGDEEYKEVEVTELSSFDPQENLDYLDMDMKGSISSGESIEVLGTEKS
TSVLSKSDSQASLTVPLSPQVVRSKAVSHRTISEDSIEVLSTCPSEALIPDDFKASYPSA
INEEESYPDGNEGAIHFQASISPPELGEMEEGSMENTPSQIDSCCIGKESDGQLLLPSSP
AHTHSDEDGVVSSPPQRHRQKDQGFRVDFSMENASPSSRDDSCEGFPAYELDPSHLLASR
DISKTSLDNYSDTTSYVSSVASTSSDRIPSAYPASPSSDRHKKRAGQNALKFIRQYPFAH
PAIYSLLSGRTLVVLGEDEAIVRKLVTALAIFVPSYGCYAKPVKHWASSPLHIMDFQKWK
LIGLQRVASPAGAGTLHALSRYSRYTSILDLDNKTLRCPLYRGTLVPRLADHRTQIKRGS
TYYLHVQSMLTQLCSKAFLYTFCHHLHLPTHDKETEELLASRQASFLKLTLGLVNEDVRV
VQYLAELLKLHYMQESPGTSHPMLRFDYVPSFLYKI
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtagtggccttcactaaagaggaagaatatgaggaagagcct
tacaatgagccggccctgcctgaggagtactcggtgccgctcttccccttcgccaaccag
ggtgctaacccctggtcaaaactgtctggggccaagttttcgagggacttcattcttatt
tccgagttttctgagcaggtgggaccccaaccgttactgaccatccccaatgacaccaaa
gtttttggcacttttgatctcaattacttctccctgcgtatcatgtcggtggattaccag
gcttccttcgtgggccatcctcctggatctgcctaccccaagctgaacttcgtggaggac
tccaaggtggtgctgggagattccaaggagggagcctttgcatacgtgcaccaccttacc
ctatacgacctggaggcccgtggcttcgtgaggcctttttgcatggcttatatctctgca
gaccagcataaaatcatgcagcagttccaggagctttcagccgaattttccagagcttct
gagtgcttgaaaactggcaacaggaaagcatttgctggggaacttgaaaaaaagctgaaa
gacttggattacaccaggacagtgctgcacacagaaacggagatccagaagaaagccaac
gacaaaggcttttactcatctcaggcaattgagaaagccaacgaactggccagtgtggag
aagtccatcattgaacatcaagacctgctgaagcagatccgctcataccctcatcggaag
ttgaaggggtgtgatttgtgtcctggtgagatggagcacatccaggatcaggccagccag
gcatccactacctctaaccctgatgagtctgccgacacagacctttacacctgcagacca
gcctacaccccaaaacttatcaaagcaaagtccacgaagtgttttgacaagaagttgaag
accttagaggagctctgtgacactgaatatttcacccagaccctgactcagctcagccac
attgaacacatgttcagaggagatctgtgttacctcctgaccagtcagattgatagagca
cttctaaaacaacagcacataacaaactttctgtttgaagactttgtggaggttgatgac
aggatggtggagaagcaagaaagcataccctctaagcccagtcaagacaggctgccttcc
aggtctctagaagaatgcccaattcctaaagtattaattagtgttggttcttacaagtcc
agtgtggagtctgtgctgatcaagatggagcaggaactgggggatgaggagtacaaggaa
gtggaggtgacggagttgagcagttttgacccccaggaaaacttggactacctggatatg
gatatgaaagggagtatcagcagtggtgaaagcattgaagttttgggcacggagaaatcc
acgtctgtgctttctaagtctgacagccaggccagcctcacggtaccattgagcccccag
gtagtccggagcaaagcagtcagccacaggaccatcagcgaggacagtattgaagtcctc
agtacctgcccctctgaggccctcatccctgatgactttaaggccagctacccaagtgcc
attaatgaagaagaatcatatccagatggcaatgagggagccatccacttccaggcaagc
attagtcctccggagctgggtgagatggaggagggcagcatggaaaacaccccatcacaa
atagactcctgctgtattgggaaggagagcgacggtcagctgctgctgccctccagtcca
gcccacacacactctgacgaggatggagtggtgagcagccccccacagcgccacaggcag
aaggaccaggggttccgtgtagacttttcaatggaaaatgccagcccttcttcccgagac
gacagttgtgaagggtttcccgcttatgagctggacccaagccacctgctggctagccgg
gacatcagtaagaccagcctggataactactcagacaccaccagctatgtgagcagtgta
gcttccaccagctcggacaggatcccttctgcttatcctgctagcccgtcttccgatagg
cataaaaagagggctggccagaacgccttaaaattcatccgccagtacccctttgcccac
ccagccatctactccctgctcagcgggaggacactcgtggtcctgggggaagatgaggcc
atagtcaggaagcttgtgactgcactggctatctttgtccccagctatggctgctacgct
aagcccgtgaaacattgggcctcctcccctttgcacattatggattttcagaagtggaag
cttattggcttgcagagagtggcctcccctgccggtgccggtacccttcatgccctgagt
cgctacagccgctacacgagcatcctggaccttgacaacaaaaccctgcgctgccccctt
tacagaggcaccctagtgccccgcctggcagaccaccgcacacagatcaagcggggcagc
acctactacctgcatgtccagagcatgctcactcagctctgctccaaggccttcctctac
accttctgccaccacctgcacctgcctacgcacgacaaggagacagaggagctgctagcc
agccgccaggcgagcttcctgaagctgaccctgggtctggtgaatgaggatgtcagggtg
gtccagtacctggctgagctgctgaagctgcactacatgcaggaatctccagggaccagc
caccccatgctcaggtttgactatgtccccagctttttgtataaaatctga
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