Cololabis saira (Pacific saury): 133418680
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Entry
133418680 CDS
T09849
Symbol
otofa
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133418680 (otofa)
Membrane trafficking [BR:
csai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133418680 (otofa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
SegE_GIY-YIG
Motif
Other DBs
NCBI-GeneID:
133418680
NCBI-ProteinID:
XP_061563481
LinkDB
All DBs
Position
18:22403816..22505922
Genome browser
AA seq
2055 aa
AA seq
DB search
MMALVVHLKTVAHLRGKGDKIAKVTFRGLPFYSRVAENCEEVAHFNELFRWPIASRLDGN
EMLEIQVYNYSKVFSNRLVGTFCMVLQKVAEEGHLELTETLIDDNNTSIKTSVNIEIRYQ
PMDGTVGVWRDGEFLDVPDDRDGVFTFETDSLLSGQSHGSGTSHGRSLQGSIPTFRKAGK
GVFSAMKLGKIKSSKDDHRKGADEPAVLDMEDLDRKAIRLAGTLDPDTISLASVTAVTTN
VSNKRSKPDIKMEPSSGRPVDYQISITVIEARQLIGLNMDPVVCVEIGDDKKYTSMKEST
NCPYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGTFKMDVGTVYSQPEHQF
YHKWAILSDPEDITAGCKGYIKCDIAVVGKGDNIKTPHKANETEEDEIEGNLLLPEGIPA
ERQWARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVQVQYAGQKGKTSVQKS
SYEPIWNEQIVFAELFPPLCKRIKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTL
GPAWVNMYGSTRQYTLMDEHQDLNDGLGEGVSFRARLLLSVAVEILDTTSPEIISSSEVQ
VDSVSNISESATGKMEEFFLFGSFLEATMIDRKIGDKPITFEITIGNYGNQIDGVNKSSS
RKKKKKDGDDEEDEDELIQNSSEDEADEDGDLASVSSTPFMRPVITDRNYFHLPYFDKKP
CVYIKSWWQDQRRRLYNSNMMDKIADKLEEGLNDVQEIFKTEKAFPERRLRGVLEELSIG
CSRFVTLANKDVNLAGRTKLDRERLKSCMREMDGMGQQARQIRTQVKKNTIKDKVKLAQN
FLQRLRFLADEPQHSIPDVFIWMMSNNKRIAYARIPSKDILYSIVDEETGKDCGKVKAVF
LKLPGKKGFGPAGWTVQAKLELYLWLGINKQRKDFLTGLPNGFEEVKAVNTGPGLHSVPP
VSLVYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQ
LLVFDDVELFGEASELREDPPIIVVELYDQDTVGKAEFIGRTFAKPTIKMCDEHYGPPRF
PPQLEYYQIFRGNCTAGELLAAFELLQIPFDTEEIRRALIAVHNFAVPQIKVGQGGRADL
PPLEGSTDSERGPILPVPLGIRPVLSRYRIEVLFWGLRDLKRVNLAQVDRPRVDIECAGR
GVQSTLIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYILVGSHAVSS
LRRFIYSPPDKTSNNWASAAKLMNGYMVLTNGFPQPRSSPSLSSRTFSRPAGDIIVNLDA
DPTIRKMDTFVKLDATSDAVVKVDMTEEESDKEKKKKKKKKKGVVEEDDEPDESVLDWWS
KYFASIETLKETLKAQEAAQAEAEEREDLEIAAETADIKPDDLLPKGSKMKEKSKEKKSS
RDKKKGHTADSAEKQRVKSKVDELVVYNKELESEFGDFEDWLHTFNLYRGKAGDDDEHAL
DDDRIVGRFKGSLCMYKLPLSEEVTREAGFDPNMGMFQSIPHNDPISVLVRVYVVRATEL
HPADINGKADPYVVIKLGKSEVKDKENYISKQLNPVFGKSFDIEATFPMESMLTVSVYDW
DLVGTDDLIGETKIDLENRFYSKFRATCGISSNYSLHRYNVWRDPMKPSQILARLCKEGK
IDGPHYGPGGKVKVANRIFTGPTDIEDENGLKRQTEEHLALTVLNHWEEIPRVGCKLVPE
HVETRPLLNPDKPGIEQGRLEMWVDMFPMDMSAPGPAIDISPRKPKRYELRVIIWNTDEV
ILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPFDYLMAEE
KIVISKKESMFSWDETEYKIPPRLTMQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQC
SLEMIRNEQDLPTISIFKQKRVKGWWPFVARDENDDMELTGKVEAELHLVTAEEAEKSPV
GLGRNEPDPLEKPNRPDTSMSWLLRPMRTMCILAWRQYKLHCAVLLTAAMGLLFLALLFF
SLPSEISHKLFNPFG
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctagtggttcacctgaagacggtggctcaccttcgggggaaaggtgataag
atcgccaaagttacattcagaggtctgcccttctacagccgtgtagcagagaactgtgag
gaggtggcccactttaatgagttatttcgatggcccattgccagcaggttggatggaaac
gagatgctggagatccaagtgtacaattacagcaaagtcttctccaacaggctggtgggg
actttctgtatggtactccagaaggtggctgaagagggacatctagagctcacagagaca
ctcatcgatgacaacaacacatcaattaagaccagcgtcaacatagagatcagataccag
cccatggatggtactgtaggagtgtggagagatggagagttcctagatgttcctgacgac
cgtgatggggtgttcacctttgaaacagacagtctgctctcaggacaaagccacgggtca
gggacgtcccatggacgatctttacagggatctatacccaccttcagaaaagcaggaaag
ggagttttttcagccatgaaactcggcaaaatcaagagctctaaagatgaccacaggaaa
ggagccgatgagccagcagtcttggacatggaggacttggaccggaaagcaatacgtctt
gctggaacgctggatccagataccatctctctggcctctgtgactgctgtcactactaac
gtttccaacaagaggtcaaagccagatatcaagatggagccaagctctggaagaccagta
gattatcagatcagcatcacagtgattgaggcgcgacagctaataggcctcaacatggac
cctgtggtgtgtgtagagattggagatgacaagaagtatacatctatgaaggagtcgacc
aactgtccatactacaatgagtattttgtctttgatttccacgtccctcctgatgtcatg
tttgataagatcatcaagctctcggttattcattccaaaaaccttttaagaagtggaacc
ttggtgggaacctttaaaatggatgtcgggactgtttactctcagcctgagcaccagttc
taccacaagtgggccatcctgtctgatcctgaagacatcacggccgggtgcaaaggatac
ataaaatgtgacattgctgttgtcgggaagggtgacaacatcaagaccccacacaaagcc
aatgagactgaagaagacgagatagagggaaatctcctgctccctgaggggattcctgca
gagaggcagtgggcgaggttttacgtgaagatctaccgtgccgagggacttccgaaaatg
aacaccagcatcatggctaatgtgaaaaaggccttcataggagagaacagagacctggtt
gatccctatgttcaagtgcaatacgctggacaaaagggcaaaacctcggtccagaagagc
agctacgagccgatctggaacgagcagatcgtattcgcagagctattccctcctctctgc
aaaaggatcaaagtccagataagagactcggacaaggtcaatgatgttgccataggaacc
cacttcatcgatctacgcaaaatatcaaatgatggtgataaagggttcttgcccaccctg
ggcccagcatgggtcaacatgtacggctccactcgccagtacacgctgatggacgagcac
caggacctgaatgacgggctcggggaaggagtgtctttcagagcgcggctcctgctttcc
gtcgctgtggagattctggacaccacctcaccggagatcatcagctccagcgaagtccaa
gtggactctgtctccaacatctccgagagcgccacagggaaaatggaagagttcttcctc
tttggttccttcctggaggccaccatgattgacaggaagattggcgacaaacccatcact
tttgaaatcacaattggtaactatggcaaccagatagatggcgtgaacaaatcgtcctcg
agaaagaagaagaaaaaggatggagatgatgaagaggatgaagacgagctgatccagaac
tccagcgaggacgaggcggacgaggacggggacctggcttcggtgtcctccactcctttc
atgaggcccgtcatcaccgacagaaactacttccatctcccctactttgacaagaagccg
tgtgtctacataaagagctggtggcaggaccagaggagacgactttataattccaacatg
atggataagattgcagacaagttggaagaaggtttgaatgatgttcaagagatctttaag
acagagaaggcttttccagagcgcagactcagaggcgtgctggaggagctcagtatcggc
tgcagtcggtttgtgacgctggccaacaaggatgtgaacctggcgggccgaaccaagctg
gatcgagaacggctcaagtcctgcatgagggaaatggacggtatgggccagcaggccagg
cagatacgcacacaggtgaagaaaaacaccatcaaggacaaagtcaagcttgcacagaac
ttcctgcagaggctccgtttccttgctgacgagcctcaacacagcatcccagatgttttt
atctggatgatgagcaataacaagcgcatcgcttacgcccggattccctccaaagacatt
ctgtactcaatagtagatgaagaaacaggaaaagactgtggaaaagtcaaagctgtcttc
ctcaagctgcctgggaagaagggctttggtcctgcaggctggacggttcaggctaaactg
gagttgtacctgtggctggggatcaacaagcaacggaaagacttcctcaccggtctcccg
aatggatttgaagaggttaaagccgtcaacacaggccctggtctgcactctgtcccccca
gtcagcctcgtctacaacatgaagcaggtgtttcagctgagagcgcacatgtaccaggcc
cgcagcctgtttgctgccgacagcagtggtctctccgaccccttcgcccgagtcttcttc
tccacacacagccaagtgactgaggttctgagcgagactctttgcccaacgtgggaccag
ctgctggtcttcgatgatgtggagctgttcggtgaggccagtgaactaagagaagaccct
cccatcattgtggtggaactctatgaccaagacactgtgggtaaggcagagtttataggt
cggacgtttgcaaagcccaccatcaagatgtgtgacgagcattacggacccccgaggttc
ccaccacagctggagtactaccagatattcagagggaactgcactgctggcgagctgctg
gctgcctttgagctgctgcagataccctttgacacagaggagatcaggcgagctctcatc
gctgtccataactttgctgttcctcaaataaaggttggtcaaggaggcagggctgacctt
cctccccttgaaggttcaacagactcagaacgtggacccatcctccccgtgccattgggc
atccgaccggtcctgagtcgctaccgtatagaggttctgttctggggattaagggacctg
aagagggtcaacttagctcaggtggaccggccccgtgtggacatagagtgtgcgggtcga
ggtgttcaatccaccctcattcagaactacaagaagaatcccaatttcagcaccctggtt
aaatggtttgaagtggaccttccggagaatgagctgctacatcctcctcttaatatccgg
gtggtggactgcagggcgtttggccgctacatcctggtaggatcccacgccgttagcagc
ctgagacgcttcatctacagccctccagacaagacgtccaacaactgggcctctgcagct
aagctaatgaatggctacatggtcctaaccaatggcttcccccagcctcgctcctcaccc
agcctctcttcccgcaccttctctcgccctgcaggtgacatcattgtcaacctggacgca
gatcctacaatccggaagatggacacattcgtcaagttagacgccacgtctgatgctgtt
gtaaaagttgacatgactgaggaagagagtgacaaagagaaaaagaagaagaaaaagaag
aagaagggggtagtggaggaagacgatgagcctgatgagagcgtgctggactggtggtcc
aaatattttgcctcaatagagacgctgaaggagaccctcaaagcccaggaggcggctcag
gccgaggcggaggagagagaggacctggagatagcagctgaaacggcagatatcaaacct
gatgaccttcttccgaaaggctccaagatgaaggaaaagagcaaagagaagaaaagctcc
agggacaaaaagaagggtcacactgcggacagtgcagagaaacaacgggttaaatcaaaa
gtggacgagctggtggtgtacaacaaggagttggagagtgagtttggggactttgaagat
tggcttcacacgttcaacttgtacaggggaaaggccggagatgacgacgaacacgctctg
gacgatgacagaattgttggtagattcaagggatccctgtgtatgtacaagctccctctg
tctgaggaagtcacaagagaggcagggtttgatcccaacatgggaatgttccagagcatt
ccacacaatgacccaatcagcgtccttgtccgtgtctacgtcgtcagggccacagagctt
catcctgctgatatcaatgggaaggctgatccatacgttgtcatcaagcttggaaagtca
gaggtcaaggacaaggagaactacatctccaagcagctcaatcctgtatttggcaaatca
tttgacattgaggccaccttcccgatggagtccatgctaacggtgtccgtatatgactgg
gatctggttggcactgacgacctgattggcgagacaaagatcgacttggagaatcggttc
tacagcaaattcagagctacatgtggcatttcatccaactattctctccatagatacaat
gtttggcgggatccgatgaagcccagccagatccttgctaggctctgcaaagaaggcaag
atcgatggaccgcactatgggcctggaggcaaagtcaaggtggcaaatcgaatctttacg
ggaccaacagacattgaggatgaaaatggtttaaagaggcagactgaggagcatttagcg
ctgacagtgttgaatcactgggaggagatccccagagttggctgcaagctggttcctgaa
cacgtggagaccagacccctgctgaaccctgacaaacctggaatcgaacagggccgcctt
gaaatgtgggtggacatgtttcctatggacatgtctgctcctggacctgccattgacatt
tcaccacgtaaaccaaagagatatgagctcagggtgattatttggaatactgacgaagta
atactggaggacgatgattacttcactggggaaaagtccagtgacatatttgtcagggga
tggctgaaaggacagcaggaggacaagcaggacacagatgtgcattaccactccctcact
ggtgagggcaacttcaactggcgctttgtgttccccttcgattacctcatggctgaggag
aagattgtcatctctaagaaagagtccatgttctcctgggatgagaccgagtacaagatc
cctcctcgtctcacgatgcaggtctgggatgcagaccacttctctgccgatgacttccta
ggtgcaattgagttggacctgaacaggttccctcgtggcgccaagacagccaagcaatgc
tccctggaaatgatccgaaatgagcaggacctgcccaccatctccatcttcaaacagaag
cgggtcaaaggatggtggccatttgtagcccgcgacgagaacgatgacatggagcttacg
ggcaaggttgaggctgaacttcacctggtgacggcagaggaggcagaaaaaagtcctgtc
ggactgggacgaaacgagcccgatccgctggagaaaccaaatcgtcctgacaccagcatg
tcgtggttgctgaggccgatgaggacgatgtgcatcttggcctggaggcaatacaagctg
cactgcgcggtgctgctcactgctgcaatgggtctgctcttcctggctctgctcttcttc
tctctcccctcagagatcagccacaagctgtttaacccctttggctaa
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