Cololabis saira (Pacific saury): 133419008
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Entry
133419008 CDS
T09849
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04140
Autophagy - animal
csai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133419008 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133419008 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133419008 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133419008 (plekhm1)
Membrane trafficking [BR:
csai04131
]
SNARE
SNARE associated proteins
Others
133419008 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
133419008 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
133419008
NCBI-ProteinID:
XP_061563973
LinkDB
All DBs
Position
19:complement(14112621..14134785)
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AA seq
1101 aa
AA seq
DB search
MFLRGAMLATQMPDTATEAKDVRQIKEKLVQSLKALQKRYVTSDAVVTSEDGDANLLCCA
LEAIFIHGIKSKYVRSEAGGRNRKGGPLPQPFFWSLLKTVTHRDVVTELEKISFVGTDVG
RCRAWLRLALNHGLLECYLLSLFREDSKLRGHYQPSALLLNTEEREVLLSYLQGLASLTF
SLSYKSAVLNEWTTTPLALAGLCPLFQVDPRDLPLNGEGHPNSKPARKESWDTVSQSSSS
SDALDVQRVCPAFVARGTGVLQGDRTAFHSSNLSLDTTGSSQLSSSYGSDSLLQGQDHRS
PAGDHWSSGDLDAPINVSITSKRPQKDGGADFRESGHCSQDSMREDSFVSSTGADQFPET
VTLSGSDSETLGPAISPQDPIMSSQDPIVSALDPADQLPNSESEPSQTSVALPSRDERPD
DQSPLKICNNASSESPSDPAAMGELKEEVRVAGVEQRSKPVQEMKQKEDSKDSNFQVHKG
PQRSSSVLSRKLSSDSLSHSHSWISDDDIYKPHLEEVPDTDDVPPSAPAAEPKASQSPPS
VVHRRQIGLSNPFRGLLKLGHLERRSTMGMWRDYYCELSPFEFRLYLNAEERTCYDNCSL
LRCEDARITSPEGRFELTFPGKRLYLRAANHDEAEDWVDRIVEAVNKCRPTSRADEQWEV
LQPCSENGVDERTLSSPSSGPSSPERCVLSSDMGISGGQEATTPSQEFDWTRTADLETDA
LKEAVLYFSTDPEARTWAPLIFSLSLEALKGFQVQDRKKSLRLTYLIEQIRDVVPDVSLG
GPAFFKVLTVKQTLRLKAESPEEARSWRSLIRGALDSYLESGEDGLCEESAATYLSTGLT
GNLHRLVQHRLKEDGALLVHLCTVPSEKGLDAQSFKCADCPQQIGPSLGRARLCEFSGQH
YCDSCHNGDITIIPSRVVHNWDLTQREVSKRALRLLAQVKVEPLLNLEQLNPELVKHAES
MAQAHSLRQRLRLLGDYLLTCRSGACKHLKARMGQRTYLLESSHLYSVMDLRQIAEGEYT
MFLTNLVQHASNHVHDCDLCTQRGFICQICHSEDILFPFQFDSTARCKDCKAVFHLACKS
GSSSCPRCQRMKKYLERDVQD
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgttcctaagaggtgccatgcttgccacgcagatgccagacacagcaacggaggccaaa
gatgtcagacagatcaaagagaagttggtacaatcacttaaagcccttcagaagagatat
gtaacatcagacgccgtggtgaccagtgaagatggggatgctaacctcctctgctgtgcc
cttgaggccatcttcatccacgggatcaagagcaagtacgtccggtctgaggccgggggc
cgcaacagaaaggggggacccctcccgcagccttttttctggagcctcctcaagactgtc
acccaccgtgatgtggtgacggagctggagaagatcagctttgtgggcacggacgtgggt
cgctgtcgggcatggctgcggctcgccctcaaccacggccttctggagtgctacctccta
tcgctgtttcgggaagactccaagctgcggggccattatcaacccagtgccttgctcctg
aacacagaggagcgagaagttctgctcagctacctccagggtctggcctcgctcacattc
agcctgtcttacaagtcagccgtcctcaacgaatggaccaccacccccctggctctggct
ggactgtgtccgctgttccaggtggacccacgcgacctgcccctgaacggagaaggacat
cccaactccaagcccgctcgcaaggaatcctgggatacggtgtctcagtcttcaagctcg
tcggatgccttggacgtgcagagagtctgcccagcgttcgtggcaagggggacaggtgtg
ttgcaaggagacaggactgcatttcactcctctaatttaagcctggacaccacaggctcc
tcccagctctcgtccagctacggctctgacagcctcctgcaggggcaggaccaccgcagc
cccgcgggagaccactggtcttcaggggacctggatgcacccattaatgtcagcatcacc
agcaagaggccacagaaggatgggggggctgatttcagggagagtggacactgcagtcag
gactccatgcgtgaagattcgtttgtctccagcacaggagctgaccagtttccagagact
gtcacactcagcggctcagacagcgagaccctgggtcctgctatatccccccaagaccct
attatgtcctcccaagaccctattgtgtcagccctagaccctgctgaccaactcccaaat
tcagaatcagagccatcgcagacatccgtcgcgctgccgtcacgtgacgagcgaccagat
gaccagtctccccttaaaatctgcaataacgcttcttctgaatcgccctcggacccagct
gcaatgggtgagcttaaggaggaagtacgtgtggctggtgttgagcagcgcagcaagcct
gtccaggaaatgaagcagaaggaggactccaaagactcgaacttccaagtgcataaaggc
ccgcagcgctctagcagcgtcctcagcaggaaattgtcctcagattcattgtcgcactca
cactcttggatttctgacgatgacatttacaaacctcacctggaagaggtgccagacact
gacgacgtgcctccctctgctccagcagctgaacccaaagcgtctcagtcacctcccagt
gtcgtccatcgaaggcaaatagggttgtccaacccctttcgaggcttgctgaaactcggc
cacctggagcggcgaagtacgatgggaatgtggcgggattattactgcgagctctcgccc
ttcgagttccgcctgtacctcaacgcggaggagcggacgtgttatgacaactgctccctt
ctgagatgcgaagatgctcgcatcacctcaccggagggccgcttcgagctgactttcccc
gggaagagactgtacctccgagcagccaatcacgatgaagcggaggactgggtggaccgg
attgtagaagccgtcaacaaatgccggccaacatcacgtgccgatgagcagtgggaggtg
ctgcagccctgcagtgagaatggagtagatgagcgcacactttcatccccatcctcgggc
ccctccagccctgagcgatgcgtattgtcctctgacatgggaataagcggagggcaggag
gcaactactccttcacaggaatttgactggactcggactgctgatttagaaacggatgcc
ctcaaagaggctgttttatacttctccacagatccggaggcccggacatgggcgcctctg
atcttctccctctcactggaggccttgaagggctttcaagtgcaagacagaaagaagtca
ttgcggctaacgtaccttattgagcaaatacgtgacgtggttcctgatgtttctctgggc
ggacccgccttcttcaaagtcctgactgtgaaacagacgctgaggctcaaggcagagagc
ccggaggaggctcgctcttggaggagtttgatccgtggagctctggactcgtatttggag
agcggggaggatggactctgtgaagagtctgctgctacatatctgagtactggattgact
ggaaatttgcacagactagtgcaacacagactgaaagaagatggagcacttctggttcat
ctctgtacggttccatcagaaaaggggctggacgctcagagcttcaaatgtgcagactgt
cctcagcagatcggcccgtccctgggcagagccaggttgtgcgagttctcgggccagcac
tactgtgactcctgccacaacggggacatcaccatcattccctcacgagtggtgcacaac
tgggacctgacacagcgggaggtgtcaaagagagccctgcggttgctggctcaggtaaag
gtggagccgctgctgaacctggagcagctgaaccctgagctggtgaagcacgccgagtcc
atggcgcaggcccacagcctgcggcagaggctgcgtctgctgggggactatctgctcacc
tgccgcagcggcgcctgtaaacacctcaaagccagaatggggcagcgaacatacctgttg
gagtcgagtcacctgtacagcgtcatggacctccgacagatagcagagggcgagtacaca
atgttcttgacgaacctggtgcaacatgcctctaaccacgtacacgactgtgacctgtgc
actcagcggggcttcatttgccagatatgtcactccgaagacatcctcttccccttccag
ttcgacagcaccgccaggtgtaaagattgtaaagccgttttccacctggcctgcaagtcc
ggcagcagctcctgtcctcgctgccagagaatgaagaaatacctggagagggatgtgcag
gactga
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