Cololabis saira (Pacific saury): 133420117
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Entry
133420117 CDS
T09849
Symbol
plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00310
Lysine degradation
csai00514
Other types of O-glycan biosynthesis
csai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
133420117 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
133420117 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
csai01003
]
133420117 (plod3)
Enzymes [BR:
csai01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
133420117 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
133420117 (plod3)
2.4.1.66 procollagen glucosyltransferase
133420117 (plod3)
Glycosyltransferases [BR:
csai01003
]
O-Glycan biosynthesis
O-linked Gal type
133420117 (plod3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
2OG-FeII_Oxy_3
Anp1
DUF6492
HK_sensor_dom_bact
Motif
Other DBs
NCBI-GeneID:
133420117
NCBI-ProteinID:
XP_061565683
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Position
20:complement(1756410..1797891)
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AA seq
730 aa
AA seq
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MVLVLVLVLSGLMGPAWAEPRRLAAENLLVVTAATEETDGFTRFVRTAREFNYTLKVLGL
GQDWKGGDVARTVGGGQKVRWLKEELLKHKDREDLVVLFVDSYDVVFASGPQELLSKFSR
LNHRVVFSAEGFCWPDQRLAPKYPQVHSGKRYLNSGGFLGFASDLSSIVQQWKYRDNDDD
QLFYTKIYLDKNQRTKFNMTLDHRSRIFQNLNGAIDEVVLKFEKNRVRVRNVAYDSLPVV
IHGNGPTKLQLNYLSNYVPTAWTYESGCRNCDDDLLNLEDLEDQDLPLVYVGVFIEHATP
FMEEFLLRLTTLNYPAARLRLFLHNNVVYHERHIQQFWDQHGSRFPEAVLVGPEEDLEEK
RARTMFIQACQQDPRCDYYFSLDSDVALTNPDTLRILIEENKSVIAPMLSKHGKLWSNFW
GALSPEGFYSRSEDYIEIVQAKRTGVWNVPYITQVYLVRGSELRSKLAKVSLYLDERMDP
DMVFCKSIRDQGIFMFVSNRDEFGRLVGSSNFNTSRLHPDMWQMFDNPLDWKEKYIHENY
SKIFEAKGGVVEQPCPDVYWFPVFSEKMCDHLVETMEDNGGWSGGSHKDERLAGGYENVP
TVDIHMNQVDYEKEWLKFLKDYIVPVTENLYPGYFPKAQAIMNFVVRYRPDEQPSLRPHH
DSSTFTVNIALNRKHVDYEGGGCRFLRYDCKVESPRKGWSFMHPGRLTHYHEGLPTTRGT
RYIMVSFVDP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggttctggttctggttctggttctgagcggattaatgggcccagcctgggccgaaccg
cggagactggcggcagagaaccttctggtcgtcacggcggcgacggaggaaacggacggt
ttcacccgattcgtccggacggcccgggagttcaactacacgctgaaggttctgggactg
ggccaggactggaaggggggcgacgtggcccggaccgtcggggggggacagaaggttcgt
tggctgaaggaggaacttctgaaacacaaggaccgggaggacctggtggttctgttcgtg
gacagctacgatgttgttttcgcctccggcccccaggaactcctctcaaagttctcccgt
ctcaaccaccgcgtggttttctcggccgagggattctgctggcccgaccagcgtctggcg
cccaaatacccacaggtgcattctgggaaacgctacctgaactctggagggttcctgggc
ttcgcctcggacctgagctccatcgtgcagcagtggaaataccgagacaacgacgacgac
cagctgttctacaccaagatctacctggacaagaaccagaggaccaagttcaacatgacc
ctggaccatcgatccagaatcttccagaacctcaacggagccatcgacgaggtggtcctg
aagtttgagaagaaccgggtccgggtcaggaacgtggcctacgactcacttcctgtggtg
atccacgggaacggacccaccaagctgcagctgaactacctgagcaactacgtcccgacc
gcctggacctacgagtccggatgcaggaactgtgatgacgacctgctgaacctggaggac
ctggaggaccaggaccttcctctggtctacgtgggcgttttcatcgaacacgcgactccg
ttcatggaggagtttctgctgcggctaacaacgctaaactaccctgctgctaggctccgc
ctcttcctgcacaacaacgtggtctaccacgagcgccacatccagcagttctgggaccaa
cacgggtctcggttcccggaggcggttctggtcggaccggaggaagatctggaggagaaa
cgggccagaaccatgttcatccaggcctgccagcaggatccccggtgtgattattacttc
agcctggactcggacgtcgccctgaccaaccccgataccctgaggatcctcatagaggag
aacaagtccgtcatcgcccccatgctctccaaacacgggaaactgtggagtaacttctgg
ggagctctgagtccggagggtttttactcccgctccgaggattacatcgagatcgtgcag
gccaagaggacgggtgtgtggaacgtcccctacatcacgcaggtttacctggtccggggc
agcgagctgcgctccaagctagccaaggttagcctgtacctggacgagcggatggacccg
gacatggttttctgcaagagcatccgggaccagggcatcttcatgttcgtttccaaccgg
gacgagttcggacggctcgtcgggtcttcgaacttcaacacgtctcgtcttcatccagac
atgtggcagatgtttgacaacccgctggactggaaggagaaatacatccatgaaaattac
tccaagatctttgaggccaaaggaggcgtcgtggagcagccgtgtcccgacgtctactgg
ttccccgtcttctcggagaagatgtgcgaccacctggtggagacgatggaggacaacgga
ggctggtccggaggatcccacaaggacgagcggctagccggcggctacgagaacgtcccc
accgtcgacatccacatgaaccaggtcgactacgagaaggagtggctgaagttcctgaag
gattacatcgtcccggttaccgagaacctgtacccgggatacttccccaaggcccaggcc
atcatgaacttcgtggtccggtaccggcccgacgagcagccgtctctccgtcctcatcac
gactcgtccacgttcaccgtcaacatcgccctgaaccggaaacacgtggactacgagggc
ggcggctgccggttcctgcgctacgactgcaaggtggagtctcccaggaagggctggtcc
ttcatgcacccgggccggctgacccactaccacgaggggctgcccaccacccgggggacc
cgctacatcatggtctccttcgtagacccctag
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