Cololabis saira (Pacific saury): 133420343
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Entry
133420343 CDS
T09849
Name
(RefSeq) toll-like receptor 2 type-2 isoform X1
KO
K10159
toll-like receptor 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04145
Phagosome
csai04620
Toll-like receptor signaling pathway
csai05132
Salmonella infection
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133420343
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133420343
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133420343
09171 Infectious disease: bacterial
05132 Salmonella infection
133420343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133420343
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133420343
04054 Pattern recognition receptors [BR:
csai04054
]
133420343
04090 CD molecules [BR:
csai04090
]
133420343
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133420343
Membrane trafficking [BR:
csai04131
]
Endocytosis
Phagocytosis
Toll-like receptors
133420343
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of breast milk
133420343
Pattern recognition receptors [BR:
csai04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
133420343
CD molecules [BR:
csai04090
]
Proteins
133420343
Glycosaminoglycan binding proteins [BR:
csai00536
]
Hyaluronan
Cell surface receptors
133420343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
LRR_1
TIR_2
LRR_9
Motif
Other DBs
NCBI-GeneID:
133420343
NCBI-ProteinID:
XP_061566007
LinkDB
All DBs
Position
20:5953899..5968629
Genome browser
AA seq
830 aa
AA seq
DB search
MLLIRIRPLGLGFSFSCRMKHACLRSFTLFLLTLLRLGRSSSTADNQPSCHRCDPQLSCN
CSCGGFTRVPTVTDQARTLDLSFNNITAVTDDDLKGHEQLKVLDLHANRIAIIHPSALDS
LWSLEELDLSDNQLSTLNHSWFSHLGALQKLHLLNNPYSRLGSPSLFRGLVGLRSLAFGG
PALQELRRGDLHGVTQLDELTVHATNNLARYQSGALADIWPLGRVTLNLHGSSLTNVTLA
SAVLGDVSYPETPITLENIHLTGNESAQGLREAARKRIRQLSFRNLSISDEVAMDFLLLF
DGVPLTSLSFDGLTLTGDGSWGPAIKTNLGSMDEIFIRNLVVVDILRFVMTADLYFILQF
QRKMSIINSKVFLVSCKTTQLMVNAEYLDVSDNLLTDLTLEYMMCEGNSTLKELRVLNIS
GNPLKSLSTVSRLVAKLTKLTHLDISKISYSSMPSSCSWPSALRYLNISVSKLTTTTPCL
PTSLEVLDLSYNDLRDFTVLLPVLRELYLSGNKFLRLPSGHLFVNLRILTIQSNTLNVFS
HSDLQSFKRLRKLQAGQNKFICSCTFVPFLQFHFQGGGDLQLTDGEASYVCDSPLHLQGK
PVSGVHLSVVECHQVLFVSVSCGLALVVGVVLCVLLWRLHVFWYLRMTWAWLKAKRNSKN
RRCRDTEGWEALLSFDAFVSYSERDAGWVENFLVPELEEPSDSNSGNARSFTLCLHKRDF
LPGRWIMDNIMNAIERSRRTVFVLSENFVHSDWCRFELDFSHFWLFDVGVDAAILILLEP
LSKDDVPKRFCKLRKIMSSTTYLEWPQEEERRPEFWRSLRNALRGDQEDH
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcatccgaatccgtccccttggtcttggtttttctttctcctgcagaatgaag
cacgcttgccttcgctccttcaccctcttcctcctcaccctactccgtctgggccggagc
tcgagcacagcggataaccagccctcctgccatcgatgcgaccctcagctctcctgcaac
tgctcctgtggtggattcactcgtgttcccacggtaacagaccaggcccggactctggac
ctctccttcaacaacatcaccgcggtgaccgacgatgacctcaagggccacgagcaattg
aaggttctggatctccacgctaacagaatagccatcatccatccgtcagcgttggactct
ctgtggagcctggaagagctggacctgtccgacaaccagctgagcaccctcaaccacagc
tggttcagtcacctgggagctctgcagaagctccacctgctcaacaacccgtacagccgt
ctgggatctccttcactgtttcgaggactcgtcggactcaggagtctggcatttggaggt
ccggctctacaggagttgaggagaggagatctgcacggcgtcacccagctggacgagctc
accgtgcacgctacaaacaacctggccaggtaccagtctggggctttggccgacatctgg
ccgctcggtcgcgtcactttaaacctacacggctcgtctctaacaaacgtcaccttggcc
tcggctgtgctcggtgacgtgtcgtaccctgagacgcccatcaccctggaaaacattcac
ctgactgggaatgagtctgctcagggtttgagagaggcggccaggaagagaatcaggcag
ctttccttccgaaacctttctatttctgatgaggtggctatggacttcctgttgctgttt
gatggggtaccgctgacctccctttccttcgatggtctcactctgactggcgacggcagt
tggggacctgccataaagaccaacctcggaagcatggacgagattttcatcaggaacctt
gtggtggtggacattttgaggtttgtcatgactgcagacctctacttcatacttcagttc
cagaggaagatgtccatcataaactccaaggtgttcttggtgtcctgtaaaacaacacag
ctgatggtgaacgcggagtatttggacgtgtcggacaacctgctgacggacctgacgctg
gagtacatgatgtgtgaaggcaacagcacgttgaaggagctccgagttttgaacatcagt
ggaaaccctctgaagtctttgtccacggtgagccggttggtcgcgaagctcaccaaactg
acccacctggacatcagcaaaatcagctacagctccatgccctccagctgctcctggccc
tccgccctccgatacctcaacatctccgtgtcgaagctcaccaccaccactccctgtcta
cccacatcgctggaggtgttggacctgagctacaatgatctcagagacttcacggtgctc
ctgcccgtgctcagagagctttacctatctgggaacaagtttctgaggttgccttctggg
catctcttcgtaaatctgcgcatcctaaccatacagtccaacaccctgaatgtgttcagc
cactcagacctccaatcgttcaaacgactccggaagctccaggcgggccagaacaagttc
atctgctcctgcacctttgttcccttcctccagtttcattttcaaggaggtggagatctt
cagttgacggatggagaggccagctacgtctgtgactcccctctccacctgcaggggaag
cccgtgagtggagtccacctctctgtcgtcgagtgtcaccaagttctgtttgtgtcggtg
agttgtgggttggcgttggtcgtcggggttgtgctgtgtgtcctgctctggcgactccac
gtcttctggtacctgaggatgacctgggcgtggctcaaggccaagcgcaactccaagaac
cggcggtgtagagatacggagggatgggaagcgttgctgtccttcgatgcctttgtttcc
tacagcgaaagagacgctggctgggtggaaaacttcctggtacctgagttggaggagccc
agtgactccaactccgggaacgccaggtcatttaccctttgcctccacaagcgggacttc
cttcctggacgctggatcatggacaacatcatgaacgctattgagcgcagtcgtcggacc
gtcttcgtcctctctgagaacttcgtccactccgactggtgccgcttcgagctggacttc
tcccacttctggctcttcgacgtcggcgttgacgcggccatcttgatcctgcttgagccg
ctgtccaaggacgacgttcccaaacgcttctgcaaactgcgcaagatcatgagctccacc
acctacctggagtggcctcaggaggaggagaggaggccggagttctggaggagcctccgc
aacgctctgaggggagaccaggaggatcattaa
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