Cololabis saira (Pacific saury): 133420515
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Entry
133420515 CDS
T09849
Name
(RefSeq) brain-derived neurotrophic factor
KO
K04355
brain-derived neurotrophic factor
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133420515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
csai04052
]
133420515
Cytokines and neuropeptides [BR:
csai04052
]
Cytokines
Growth factors (RTK binding)
133420515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
133420515
NCBI-ProteinID:
XP_061566197
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All DBs
Position
2:complement(27277378..27278792)
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AA seq
270 aa
AA seq
DB search
MTILFLTMVISYFSCMRAAPLRDAPGMRGHRTEGYLGAAAATAARGHGTPQSGGGPGQRG
ELPSLTDTFEQVIEELLEVDGEAAQLGQGADKGQGGGGPSPAVATETKDVDLYNSRVMIS
NQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPSRRGELSVCDSISQWVTAVDKKTAI
DMSGQTVTVMEKVPVPNGQLKQYFYETKCNPIGYTKEGCRGIDKRHYNSQCRTTQSYVRA
LTMDTKKKIGWRFIRIDTSCVCTLTIKRGR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctgttccttactatggttatttcatacttcagttgcatgagagctgcgccc
ctgagagatgccccgggcatgcggggccatcggacggaaggctacttgggcgctgctgct
gcgacggccgcccgaggccacgggactccacagagcggcggtgggccgggccagcgcgga
gaactcccctcactcacagacacatttgagcaagtgatagaggagctgctcgaggtggat
ggagaggcggcgcagctgggacagggggctgataagggccagggaggtgggggcccgtcg
cctgcggtcgccacagagaccaaggatgtcgacctgtacaactcgcgggtgatgatcagc
aaccaagtgcctttggagccgccgttgctctttcttctggaggaatacaaaaactatctg
gatgccgctaacatgtccatgagggtgcggcgacactccgatccctcgcggcgcggagag
ctcagtgtgtgtgacagtattagccaatgggtgacggctgtggataaaaagacggcaata
gacatgtctgggcagacagttaccgtcatggaaaaggtccctgtccccaatggccaactg
aagcaatacttttatgagaccaaatgcaaccccatagggtacacaaaggagggctgcaga
ggaatagacaagcggcattataactcccaatgcaggacaacccagtcctacgtgcgagcg
ctcaccatggataccaaaaagaagattggctggcggtttataaggatagacacttcatgt
gtatgcacattgaccattaaaagagggagatag
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