Cololabis saira (Pacific saury): 133421623
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Entry
133421623 CDS
T09849
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
KO
K04359
platelet-derived growth factor subunit A
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04020
Calcium signaling pathway
csai04510
Focal adhesion
csai04540
Gap junction
csai04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133421623 (pdgfab)
04020 Calcium signaling pathway
133421623 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133421623 (pdgfab)
04540 Gap junction
133421623 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
133421623 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
csai04052
]
133421623 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133421623 (pdgfab)
Cytokines and neuropeptides [BR:
csai04052
]
Cytokines
Growth factors (RTK binding)
133421623 (pdgfab)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Heparan sulfate / Heparin
Growth factors/receptors
133421623 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
DUF2112
Motif
Other DBs
NCBI-GeneID:
133421623
NCBI-ProteinID:
XP_061567275
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All DBs
Position
21:19553103..19569804
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AA seq
208 aa
AA seq
DB search
MRAAVCYFLLWTTYLLATAEEAEFPQELIDRLSHSEIRSISDLQRLLEIDSFGGTGNDVN
EEPKHHKHHNHHKNFSRHHGYHNDLKRSQLHSRRKRSIVEEAVPAACKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVKRCTGCCNTSNMCCHPSRKHHRSVKVAKVEYVKRRPKLKEVIV
RLEDHLECVCTSHHHAAEHSDAETVDVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcagtttgttacttcctgctgtggacgacgtacctgctggccaccgctgag
gaagcggagttcccccaggagctgatcgaccgactctctcacagtgaaatccgcagcatc
agcgacctccagcggctactggagattgactcctttggaggtacggggaacgatgttaat
gaggagcccaagcaccacaagcatcacaaccaccataagaacttctctcgtcatcatggt
taccacaatgacctgaagcgctcacagctgcacagccgccgcaagagaagcattgtcgag
gaggcggtcccagcagcgtgtaagacgcgaacggtgatctacgagatccccaggagccag
gtggatcccacgtctgccaacttcctgatatggcctccctgtgtggaggtgaagcgctgc
acgggctgctgcaacaccagcaacatgtgttgtcacccgtcccgcaagcatcaccgcagc
gttaaggtagctaaggtggagtacgtgaagagaagacccaagctgaaagaagtcattgta
cggttagaagaccacctggagtgtgtgtgtacatcacaccatcatgcagcagagcactca
gatgcagaaacagtggatgtgaggtga
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