Cololabis saira (Pacific saury): 133421648
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Entry
133421648 CDS
T09849
Symbol
ints1
Name
(RefSeq) LOW QUALITY PROTEIN: integrator complex subunit 1
KO
K13138
integrator complex subunit 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133421648 (ints1)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
133421648 (ints1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
133421648
NCBI-ProteinID:
XP_061567321
LinkDB
All DBs
Position
21:complement(14703812..14725345)
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AA seq
2197 aa
AA seq
DB search
MNRPKPTTLRRPSAAKSSGHPPPGDFIALGSKSQSGEAKAPAVLLKPTSTGLPTDRKREA
SSSLPSSSGLSTLTKRPKLSTTPPVSALARLSDAAAVDKRAISPSIKEPSVVPIEVSPAL
LLDEIEAAESEGNDDRIEGLLCGAVKQLKMNRAKPDITLYLSLMFLAKIKPNVFATEGII
EALCSLLRRDASINFKAKGNSLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWV
DSSHCKNFVDNIQTAFGTKMPPKSMLLQADTGRSAGDLSAGSSPHPSTPDEDDNQTELLI
AEEKLSPEDEGQIMPRYEELAESVEDYVLDVLRDQLNRRQPMDNVSRNLLRLLTATCGYK
EARLMAVQRLEMWLQNPKLTRPAQDLLMSLCMNCNTHGADDMEVISNLIKIRLKPKVLLN
HYMLCVRELLNAHRDNLGTTVKLVIFNELSNARNPNNMQVLHTVLQHSPEQAPKFLAMVF
QDLLTNKDDYLRASRALLREIIKQTKHEINFQSFCFGLMQERKEASYVDMEFKERFVIQV
TDLLTVSMMLGITAQVKEAGIAWDKGEKKNLEVLRSFQNQIASIQRDAVWWLHTVVPTIS
KVGAKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPLLEDTLMRILVIGL
SRDLPLGPADAMELADHLVKRAAGVHSDDLEVLKVERIQLIDAVLNLCTYHHPENIQLPT
GYQPPNLAISTLYWKAWLLLLVVAAFNPQKIGLAAWDGYPTLKMLMEMVMTNNYSYPPCT
ITDEDTKTEMINRELQISQREKQEILAFESHLAAASTKQTITESNSLLLSQLTSLDPQGS
SRRPPPQVQEQVKTLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLADLVQSSEGS
LDVLPVQCLCEFLLHDAADDNLPVEDDDEGESKEQKAKKRQRQQKQRQLLGRLQDLLLGP
KADEQTTCEVLDYFLRRLSSSQVASRVLAMKGLSLVLTEGGLKDGEERDQPMEEDSADAE
LLPGYQWLLQDLPKLPLFDSVRGMTSTALQQAIHMETDPQTISAYLIYLSQHAPVEEQAS
HNDLALDIARLIVERSTIMNSLFCKHSCRPESDAVLSAFLTIFSSYIRRMRKTKEGEDLY
SWSESQDQVFLRWTTGETATMHILVVHAMVILLTLGPPKGESDFYSLLDIWFPDKKPLPT
AFLVDTSEEALLLPDWLKLRMIRSEVSRLVDAALQDLEPQQLLLFVQSFGIPVSSMSKLL
QYLDQAVSHDPQALEENIMDKHYMAHLVEVQHERGATGGHTFHGLLSSSIPSGRDSSETS
KVTVTMETSHSSVKMRAAAQLPIVGPEDDLTGMLLQIFPLKVDPRWPGPPPTQLSLALQQ
SLAKELMRAKQGQIQQGGLAFRLLQAIAALLTSAHAGPIVMSMHRSHALSCPLMRQLHLY
QRLVSQDIPFSSLFIKVIVEMLIWLDNPTVEAGPLKTLLKSFAGQSSHKHRHSDVRTGFI
HLAEALAYRRDTEVPLRGIIAMLKAGERCNAEAELIGKVLQGLMEVKSPYLEELLSLLMT
VSTQNGTAGPVAMVISLLLLESEELAVKKEVDLKSGPEVTRSGLSSGLLVDWLEHLDPEV
TSVCSDLQQKLLFSLNKARGTPAYRPYLLALLTHQSNWSTLLQCISALLNKHRDYKLDPS
SALDFLWACSHIPRIWQGRDQKIPQKKTEKFVLRLSSEELISLVDLMLSESELNSGDSAH
NDKSGLDQASCSLIQSRLPLLRSYCDGALENIKKVSEYLISCTKKWEDSAMSKRCQNLLL
QIYLHFPEVIMHVALPEGTFSSGGAADVSSCKLDVLVHRLVTLLADPGDSKSAEGRASDA
NLACRKLAVSHPVLLLRHLPMISGLLHGRIHLNLHEFRQQNHMTFFSNVLAILQLLQPLV
FHSEHQRALQDCLLSFMKVLQVQLASFQGYRGNFQRSRSPLFFINKFLQFTQKYITHNAA
AAIPYLQKHSDILQNLCAENPDLVQLKSLLAGLTLPVRRSSTDVSAEERDDDLSTGTLPL
VNISTSISLTPADMTMYLKKMSKGEAVEDVLEVLTEVDDRSKRSPEIIQYFINDLQRLMT
SSEELCRNMAFSLALRCIQNNPCLATDFLPTFMYCMGSGNFDVVQTALRNLPEYVLLCQE
HADILLHKALLVGIYGQIDTSTMIAESMKVLHMEATT
NT seq
6594 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtccaaaacctacaactctcaggcggcccagtgctgccaaatcatcaggtcat
cctccacctggagatttcatcgctcttgggtccaagagccagtctggagaggccaaagcc
cccgcagtcctcctgaagcccacctccacaggtttacccactgaccgtaagagagaggcc
tcctcgtctctaccctcctcatcgggcctgtccaccctcaccaagcgccctaaactgtcc
accacccctcccgtgagcgccctggcacgactcagtgatgctgcagcggtagacaagagg
gcgatatccccatccataaaggagccgtctgtggtccccattgaggtgtctcctgcgctt
ctgctggatgagattgaagctgcagagtcggagggaaatgatgatcgcattgagggatta
ctgtgtggagcggtgaaacagctaaagatgaacagagccaaacctgacatcacactgtac
ctcagcctcatgtttctggccaaaatcaagcccaatgtctttgctactgaagggattatt
gaggctttgtgcagcctcttgcgccgggacgcctcgatcaactttaaagcaaaaggaaac
agcttggtttctgtcctggcttgcaacctgctcatggcagcatatgaggaggatgaaaac
tggccagagatcttcgtcaaagtgtacattgaggactcgctgggggagagaatctgggtg
gacagctctcactgtaagaactttgttgacaatatccagactgcttttggcacaaaaatg
cctccaaagagcatgctgctgcaggcggatactggccgctccgctggagatctcagcgca
ggtagcagccctcatccatcaactccagatgaagacgacaatcagacggagctgctgata
gcagaagagaaactcagtcctgaggacgagggccagatcatgccaaggtacgaggaatta
gcagagagtgtggaggactacgtgctggacgtacttagggatcagttgaaccgcaggcag
ccgatggacaacgtgtcccgaaacctgctccgtcttctcactgcgacatgtggctacaaa
gaggctcgactcatggctgttcagaggctggagatgtggctccagaacccaaagctgact
cggccggcccaggacctcctcatgtcgttgtgcatgaactgcaacacacacggagcagat
gacatggaagtgatctccaacctgattaagattcgactcaaacctaaagtccttctcaac
cactacatgctgtgtgtccgagagttgctgaacgcgcacagagacaacctgggaacgacg
gtgaagctggtgatcttcaacgagctgtccaatgccaggaatcccaacaacatgcaggtc
ctgcacacggtgctgcagcacagccccgagcaggcacccaagttcttggcgatggtgttc
caggacctgctaacaaataaggatgattacctccgggcttcccgggctctgctgagagag
atcatcaaacagaccaagcacgagatcaacttccaatctttctgtttcggtttgatgcag
gagagaaaagaggccagctacgtggacatggagttcaaagagcgctttgtgatccaggtg
actgacttactcaccgtctccatgatgctgggcatcactgctcaggtcaaggaagctggg
attgcctgggacaaaggagagaagaaaaacctggaggtcctgaggtcatttcagaatcag
attgcttccatccagagagacgccgtgtggtggcttcacacggtggttcctaccatcagc
aaagtcggcgccaaagactacgttcactgccttcacaaagtgctgttcaccgagcagcca
gagacgtactacaagtgggacaactggcctccggagagcgatagaaatttcttccttcgc
ctctgctccgaggtgcccctgctggaggacacgctcatgcgcatcctggtcatcgggctt
tcacgcgatttgcccctgggcccagcggacgccatggagctggcggatcatttggtcaag
agggctgccggggttcactccgacgatctagaggtcctgaaggtggagcggatccagctc
attgatgccgtgttgaatctgtgtacataccaccatccagagaacatccagctgccaaca
gggtaccaacctccaaatttggcaatctccactctctattggaaggcatggctcttgttg
cttgtggtggctgcctttaatcctcagaagataggtttggctgcctgggacggctatcct
acgctgaaaatgctgatggaaatggttatgacaaataactatagttaccctccttgcacc
attactgacgaggacacgaagacggagatgatcaacagggagctgcagatctctcagagg
gagaaacaggagattttggcttttgagagccacttggccgctgcctccaccaaacagacc
atcacagagagcaacagcttgctgttgtctcagctcaccagtctggacccacaggggtcc
tcccggcggcctcctcctcaggtccaggagcaggtcaaaaccctcaaccagtctctgcgt
ctgggtcacctcctctgtcgcagccgcaatccagacttccttctcaacatcatccagaga
caggcttcctctcagtccatgccatggttggctgacttggtccagtccagcgaggggtcc
ttggatgtacttccagtccagtgtttgtgtgaattccttctgcatgatgctgctgatgac
aacctgccagtagaggatgatgatgaaggagagagcaaagagcagaaggccaagaagaga
caaaggcagcagaagcaaagacagctacttggacggctccaggatcttctcttgggtcct
aaagcagacgagcagaccacgtgtgaagtgctggactacttcctgcgtcgcctcagctct
tctcaggtggcgtcaagagttctcgctatgaagggtttgtcgctggtgctgactgaagga
ggcctgaaagacggagaggagcgagaccagcccatggaggaggattctgcagacgctgaa
ctgttgccgggataccagtggctgctgcaagacctgcccaagctcccgctgttcgacagc
gtgcgcgggatgacgtccaccgccctgcagcaggccattcacatggaaacggacccacag
acgatcagtgcctatctcatctacctttcccagcatgcaccagtggaggagcaggcttcc
cataacgacctagctctggacatcgcccggctgatcgtggagcgctccaccatcatgaac
agcctgttttgcaaacactcctgcagacctgagtcggacgccgtgctctctgctttcctc
accatcttttcctcctacatcaggaggatgaggaagaccaaggagggcgaggatctgtac
agctggtccgaatctcaagaccaggtttttctgcgttggactacaggagagacggccacg
atgcacatccttgtggtccatgccatggtcatcttgctgactttggggcctcccaaagga
gagagtgatttctacagtctcttggacatttggtttcctgacaagaagcctctccccacc
gccttcctcgtggacacgtctgaggaggctcttctgctgcccgactggttgaagctccgg
atgatccgatcagaagtgtctcgattggttgatgcagctttgcaagacctggagcctcag
cagctgctgctgtttgttcagtcctttggcattccggtctccagtatgagtaaacttctc
cagtatctggatcaagccgtttctcacgatccacaggcgctggaggaaaatatcatggac
aaacactacatggctcacttggttgaggtgcaacatgagcgcggcgccactggggggcac
actttccatggtttactcagctcttccattccttcaggcagagattcgtctgaaaccagc
aaggtcacagttacaatggaaacatctcatagctccgtgaagatgagagcagccgcccag
cttcccatagttgggcctgaggatgatctcaccggcatgctgctccagattttcccctta
aaagtggaccctcgctggcccggcccccctcccactcagctctcgctggccctgcagcag
tccctggcaaaagaactgatgcgggccaagcagggtcagattcagcaggggggtctggcc
ttccgtctgctgcaggccatcgcggccctgctcacgtcggcccacgcagggcccatcgtc
atgtccatgcaccgcagccacgcgctctcctgcccgctgatgcgccagcttcacctctac
cagcgtctcgtgtcccaggacattcctttttcttcactgttcatcaaagtcattgtcgag
atgttaatctggttggacaacccgaccgtggaggcaggaccactgaagaccctgctcaaa
tccttcgctggtcagagctctcacaaacacaggcacagtgacgtgcgtacaggtttcatc
cacctcgccgaggcgttggcatatcgcagagacactgaagtgccactaagaggcatcata
gcgatgctgaaagccggagaaagatgtaacgcagaagctgagctcattggcaaagtgtta
caagggctgatggaggtgaagtccccgtacttggaggagcttctgtctctgctgatgaca
gtcagcactcagaatgggacggccggccctgttgccatggtgatatcgctgctccttctg
gaaagcgaggagctagctgtgaaaaaggaagtggatttgaagagtggtcctgaagtaacc
aggtcgggactgagctcggggctcctggttgattggctggagcatcttgaccctgaagtt
acgtctgtgtgctcggaccttcagcagaagctgctgttttccctcaacaaggcacgaggc
accccggcctacagaccttatctcttggccctgctgacccatcagtccaactggtccacg
ctgctgcagtgcatcagcgctctcctcaacaaacacagagactacaaactagatccatct
tcagccttggacttcctgtgggcgtgcagccacattcctcgtatctggcagggccgcgac
cagaagatccctcaaaagaaaacggagaagttcgtcctgcgactcagctccgaggagctc
atcagtctggtggacctgatgctgtcggagtcggagctcaacagcggagactcggcccac
aacgacaaaagcggtctggaccaggcctcctgctccctcatccagtccaggctgcccctc
cttcgctcctactgcgacggagcgctagaaaacatcaagaaagtctcagaatacctcatc
agctgcacaaaaaagtgggaagacagtgcgatgagcaagcggtgccagaacctgctgctg
cagatctacctgcacttcccagaggtcatcatgcacgtcgcccttcctgaaggaacattc
agcagcggaggggccgccgacgtcagcagctgcaagctcgatgtcctcgtccatcgcctg
gtcacgctgctcgcagaccccggagactccaagtccgccgagggccgcgcgtccgacgct
aatctggcgtgcaggaagctcgccgtgtcacaccctgtccttttactccgacacctgccc
atgatttcaggactcctacatggccgcattcacctaaacctgcacgagttccggcagcaa
aaccacatgacgttcttcagcaacgttctggccatcctgcagctgctgcagccgctggtt
ttccacagcgagcaccagagggcgcttcaggactgtcttctgtccttcatgaaagtcctc
caggtgcagctcgcaagcttccaaggctacagaggaaactttcagaggagtcggtctcca
ctcttcttcattaataagtttctgcagttcacacagaagtacatcacccacaacgcggcg
gccgccattccttacctgcagaaacactctgacatcttgcagaatttgtgtgcagaaaac
ccagacctcgtccagctgaaatctctgctagctggactcactttgcctgtaagaagatcc
tctacggatgtttcagcagaagaaagagatgatgacttgtcgactggtactttaccactg
gtcaacatatctacctcgatttcactaacgcctgcagacatgacgatgtacttgaaaaag
atgtccaaaggagaagcagtggaagacgtgttagaagtgttgacagaagtggatgacagg
tcaaagaggagcccagaaatcatacagtacttcattaacgacctgcagagactcatgacg
tcgtcggaggagctgtgtcggaacatggccttcagcctggccctgcgctgcatccagaac
aacccctgcttggcaacagacttcctgccgacgttcatgtactgtatgggcagcggtaac
tttgatgtggtgcagactgctctgaggaatcttccagagtatgttcttctctgtcaagaa
catgcagacatcctgctccacaaggcgttgttagtgggcatctacggacaaatcgacacc
agcacaatgatcgccgagtccatgaaggtcctccacatggaggcaacgacgtaa
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integrated database retrieval system
